Results 21 to 30 of about 303,688 (298)
KLK3 SNP–SNP interactions for prediction of prostate cancer aggressiveness [PDF]
Scientific Reports, 2021 AbstractRisk classification for prostate cancer (PCa) aggressiveness and underlying mechanisms remain inadequate. Interactions between single nucleotide polymorphisms (SNPs) may provide a solution to fill these gaps. To identify SNP–SNP interactions in the four pathways (the angiogenesis-, mitochondria-, miRNA-, and androgen metabolism-related pathways)
Hui-Yi Lin +73 more
openaire +8 more sources
Journal of Investigative Dermatology, 2005 Imagine a deck of new cards perfectly sequenced from One of Clubs to the Ace of Spades. Shuffle once (overhand method), and most cards are still in order, e.g., ... 9, 10, Jack, King, Queen, Ace of Spades. Shuffle twice, three times, and so on and more and more randomness is introduced into the deck. Cards that are juxtaposed next to one another, e.g.,
openaire +3 more sources
NABIC SNP: an integrated database for SNP markers [PDF]
Bioinformation, 2015 The National Agricultural Biotechnology Information Center (NABIC) constructed a web-based database to provide information about 54,310 single nucleotide polymorphisms (SNPs) identified in the seven species in a high-throughput manner. The database consists of three major functional categories: SNP marker search, detailed information viewer and ...
Chang-Kug Kim +3 more
openaire +2 more sources
Microarrays, 2016 The papers published in this Special Issue “SNP arrays” (Single Nucleotide Polymorphism Arrays) focus on several perspectives associated with arrays of this type. The range of papers vary from a case report to reviews, thereby targeting wider audiences working in this field. The research focus of SNP arrays is often human cancers but this Issue expands
openaire +2 more sources
SNP-RFLPing: restriction enzyme mining for SNPs in genomes [PDF]
BMC Genomics, 2006 Abstract Background The restriction fragment length polymorphism (RFLP) is a common laboratory method for the genotyping of single nucleotide polymorphisms (SNPs). Here, we describe a web-based software, named SNP-RFLPing, which provides the restriction enzyme for RFLP assays on a batch of SNPs and genes from the ...
Yu-Huei Cheng +4 more
openaire +3 more sources
Multiplex SNP Discrimination [PDF]
Biophysical Journal, 2007 Multiplex hybridization reactions of perfectly matched duplexes and duplexes containing a single basepair mismatch (SNPs) were investigated on DNA microarrays. Effects of duplex length, G-C percentage, and relative position of the SNP on duplex hybridization and SNP resolution were determined. Our theoretical model of multiplex hybridization accurately
Fish, Daniel J. +4 more
openaire +4 more sources
SKM-SNP: SNP markers detection method
Journal of Biomedical Informatics, 2010 SKM-SNP, SNP markers detection program, is proposed to identify a set of relevant SNPs for the association between a disease and multiple marker genotypes. We employ a subspace categorical clustering algorithm to compute a weight for each SNP in the group of patient samples and the group of normal samples, and use the weights to identify the subsets of
Liu, Y +4 more
openaire +5 more sources
Bioinformatics, 2009 Abstract Motivation: High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments. SNP-o-matic is a fast, memory-efficient and stringent read mapping tool offering
Manske, H, Kwiatkowski, D
openaire +4 more sources
Posición sobre los componentes del sistema de evaluación, a propósito del área de lenguaje
Enunciación, 1996 Patricia Duarte A. +7 more
doaj +1 more source
SNP-PHAGE – High throughput SNP discovery pipeline [PDF]
BMC Bioinformatics, 2006 AbstractBackgroundSingle nucleotide polymorphisms (SNPs) as defined here are single base sequence changes or short insertion/deletions between or within individuals of a given species. As a result of their abundance and the availability of high throughput analysis technologies SNP markers have begun to replace other traditional markers such as ...
Perry B. Cregan +6 more
openaire +4 more sources