Results 31 to 40 of about 23,427,651 (311)

HaploSNPer: a web-based allele and SNP detection tool [PDF]

, 2008
Background - Single nucleotide polymorphisms (SNPs) and small insertions or deletions (indels) are the most common type of polymorphisms and are frequently used for molecular marker development.
C Gerard van der Linden, Roeland E Voorrips, Leunissen, J.A.M., Tang, J., Voorrips, R.E., Jifeng Tang, Jack AM Leunissen, Ben Vosman, Vosman, B., Vosman Ben, van der Linden C Gerard, Voorrips Roeland E, Tang Jifeng, Leunissen Jack AM, Linden, C.G., van der   +14 more
core   +1 more source

SNP-index graph and development of dCAPs marker.

, 2023
(a) SNP-index graph generated by the MutMap analysis of the fon7 gene. Green and orange lines indicate 95% and 99% confidence intervals, respectively. Red regression lines were obtained by averaging SNP indices from a moving window of five consecutive ...
Yoon Kyung Lee (8560953), Phyu Phyu Maung (14333958), Backki Kim (4263070), Su Jang (3706168), Zhuo Jin (6458966), Hee-Jong Koh (45781)   +5 more
core   +1 more source

Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages [PDF]

, 2012
There is increasing evidence that strain variation in Mycobacterium tuberculosis complex (MTBC) might influence the outcome of tuberculosis infection and disease.
Coscollà Mireia, David Stucki, Feldmann, Julia, Yeboah-Manu, D., Comas Iñaki, Gagneux, Sebastien, Hostettler Simon, Simon Hostettler, Thembela Huna (149818), Huna, Thembela, Huna Thembela, Malla Bijaya, Mireia Coscollà, Julia Feldmann (149820), Feldmann Julia, Stucki, David, Iñaki Comas (57109), Thembela Huna, Hostettler, S., Comas, Iñaki, Malla, Bijaya, Stucki David, Dorothy Yeboah-Manu, Sonia Borrell, David Stucki (149811), Huna, T., Gagneux, S., Yeboah-Manu, Dorothy, Fenner, Lukas, Borrell, Sonia, Dorothy Yeboah-Manu (120059), Comas, I., Bijaya Malla, Gagneux Sebastien, Fenner, L., Borrell Sonia, Hostettler, Simon, Lukas Fenner, Fenner Lukas, Bijaya Malla (149813), Sebastien Gagneux (149824), Mireia Coscollà (149823), Coscollà, Mireia, Sebastien Gagneux, Malla, B., Simon Hostettler (149816), Sonia Borrell (149821), Borrell, S., Julia Feldmann, Coscolla, M., Yeboah-Manu Dorothy, Lukas Fenner (149822), Iñaki Comas, Feldmann, J., Stucki, D., Hostettler S, Fenner L, Yeboah-Manu D, Gagneux S, Huna T, Feldmann J, Borrell S, Malla B, Comas I, Stucki D, Coscollà M   +65 more
core   +3 more sources

SNP-based association analysis.

, 2022
The x-coordinate is the transcriptome length. A The results of the associations between SNPs and oleoresin yield. B The results of the associations between SNPs and Ht. C Associations between SNPs and DBH. D Associations between SNPs and ARW.
Shu Diao (126452), Qifu Luan (12035547), Xianyin Ding (12035544), Harry X. Wu (9649628), Jingmin Jiang (11981705), Yini Zhang (7045658)   +5 more
core   +1 more source

Simulasi Metode Statistik untuk Seleksi Single Nucleotide Polymorphism

Biotropika: Journal of Tropical Biology, 2019
Kemajuan teknologi sekuensing menyebabkan peningkatan ketersediaan sekuen genom organisme. Ribuan strain dan isolat dari berbagai populasi organisme telah diisolasi serta diketahui sekuen genomnya.
Mohamad Ikhsan Nurulloh, Hidayat Trimarsanto, Yustinus Ulung Anggraito, Endah Peniati, R Susanti   +4 more
doaj   +1 more source

Effect of Combining Multiple CNV Defining Algorithms on the Reliability of CNV Calls from SNP Genotyping Data [PDF]

Genomics & Informatics, 2012
In addition to single-nucleotide polymorphisms (SNP), copy number variation (CNV) is a major component of human genetic diversity. Among many whole-genome analysis platforms, SNP arrays have been commonly used for genomewide CNV discovery.
Soon-Young Kim, Ji-Hong Kim, Yeun-Jun Chung   +2 more
doaj   +1 more source

Using GWAS summary data to impute traits for genotyped individuals

HGG Advances, 2023
Summary: Genome-wide association study (GWAS) summary data have become extremely useful in daily routine data analysis, largely facilitating new methods development and new applications.
Jingchen Ren, Zhaotong Lin, Ruoyu He, Xiaotong Shen, Wei Pan   +4 more
doaj   +1 more source

SNP-based genomic scans.

, 2023
These scans are similar to the heterozygosity-based analysis (Figs 4 and S9), but focusing on biallelic SNP changes (rather than accession-based frequencies).
Urszula Kania (16877777), Maaike de Jong (3161322), Sally Ward (766318), Ottoline Leyser (25869), Liron Shenhav (6845174), Hugo Tavares (7411373), Raj K. Pasam (7411376), Anne Readshaw (9231296), Hayley McCulloch (16877780), Elizabeth Forsyth (16877783)   +9 more
core   +1 more source

Genetic Profile of Brucella melitensis Strains Isolated on the Territory of the Russian Federation, Based on Analysis of Single Nucleotide Polymorphisms Following Whole Genome Sequencing

Проблемы особо опасных инфекций
The aim of the work was to conduct a comparative phylogenetic analysis based on wgSNP of complete genomes of Brucella melitensis strains circulating in the territory of the Russian Federation.Materials and methods. wgSNP typing of 412 B.
I. V. Kuznetsova, D. A. Kovalev, S. V. Pisarenko, O. V. Bobrysheva, N. A. Shapakov, A. M. Zhirov, N. S. Safonova, D. G. Ponomarenko, A. A. Khachaturova, E. B. Zhilchenko, N. S. Serdyuk, A. N. Kulichenko   +11 more
doaj   +1 more source

Population genetic analysis of ascertained SNP data

Human Genomics, 2004
The large single nucleotide polymorphism (SNP) typing projects have provided an invaluable data resource for human population geneticists. Almost all of the available SNP loci, however, have been identified through a SNP discovery protocol that will ...
Nielsen Rasmus
doaj   +1 more source