Results 41 to 50 of about 125,026 (143)

Species-specific SNP arrays for non-invasive genetic monitoring of a vulnerable bat

Scientific Reports
Genetic tagging from scats is one of the minimally invasive sampling (MIS) monitoring approaches commonly used to guide management decisions and evaluate conservation efforts.
Rujiporn Thavornkanlapachai, Kyle N. Armstrong, Chris Knuckey, Bart Huntley, Nicola Hanrahan, Kym Ottewell   +5 more
doaj   +1 more source

PanSNPdb: the Pan-Asian SNP genotyping database.

PLoS ONE, 2011
The HUGO Pan-Asian SNP consortium conducted the largest survey to date of human genetic diversity among Asians by sampling 1,719 unrelated individuals among 71 populations from China, India, Indonesia, Japan, Malaysia, the Philippines, Singapore, South ...
Chumpol Ngamphiw, Anunchai Assawamakin, Shuhua Xu, Philip J Shaw, Jin Ok Yang, Ho Ghang, Jong Bhak, Edison Liu, Sissades Tongsima, HUGO Pan-Asian SNP Consortium   +9 more
doaj   +1 more source

Effects of DNA mass on multiple displacement whole genome amplification and genotyping performance

BMC Biotechnology, 2005
Background Whole genome amplification (WGA) promises to eliminate practical molecular genetic analysis limitations associated with genomic DNA (gDNA) quantity.
Haque Kashif A, Qi Ying, Bergen Andrew W, Welch Robert A, Chanock Stephen J   +4 more
doaj   +1 more source

Maast: genotyping thousands of microbial strains efficiently

Genome Biology, 2023
Existing single nucleotide polymorphism (SNP) genotyping algorithms do not scale for species with thousands of sequenced strains, nor do they account for conspecific redundancy.
Zhou Jason Shi, Stephen Nayfach, Katherine S. Pollard   +2 more
doaj   +1 more source

Multiplex-Ready PCR: A new method for multiplexed SSR and SNP genotyping

BMC Genomics, 2008
Background Microsatellite (SSR) and single nucleotide polymorphism (SNP) markers are widely used in plant breeding and genomic research. Thus, methods to improve the speed and efficiency of SSR and SNP genotyping are highly desirable.
Nguyen Thao M, Hayden Matthew J, Waterman Amanda, Chalmers Kenneth J   +3 more
doaj   +1 more source

Study on the concordance between different SNP‐genotyping platforms in sheep [PDF]

, 2021
Héctor Marina, Praveen Chitneedi, R. Pelayo, Aroa Suárez‐Vega, Cristina Esteban‐Blanco, Beatriz Gutiérrez‐Gil, J. J. Arranz   +6 more
openalex   +1 more source

Nucleic acid amplification-based HER2I655V molecular detection for breast cancer

Journal of Oncological Sciences, 2019
Single Nucleotide Polymorphism at codon 655 of HER2 gene has been extensively evaluated for its role as a susceptible biomarker for breast cancer development and the contradictive result of its role has been a debate among researchers as evidenced from ...
Bugi Ratno Budiarto, Pimpin Utama Pohan, Desriani   +2 more
doaj   +1 more source

Prim-SNPing: a primer designer for cost-effective SNP genotyping

BioTechniques, 2009
Many kinds of primer design (PD) software tools have been developed, but most of them lack a single nucleotide polymorphism (SNP) genotyping service.
Hsueh-Wei Chang, Li-Yeh Chuang, Yu-Huei Cheng, Yu-Chen Hung, Cheng-Hao Wen, De-Leung Gu, Cheng-Hong Yang   +6 more
doaj   +1 more source

Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology

BMC Genomics, 2011
Background Genetic markers are pivotal to modern genomics research; however, discovery and genotyping of molecular markers in oat has been hindered by the size and complexity of the genome, and by a scarcity of sequence data.
Chao Shiaoman, Brown Guedira Gina L, Maughan P Jeffrey, Jellen Eric N, Adhikary Dinesh, Wisniewski Morehead Nicole H, Anderson Joseph M, Tinker Nicholas A, Rubenfield Marc J, Lutz Joseph D, Lazo Gerard R, Oliver Rebekah E, Beattie Aaron D, Carson Martin L, Rines Howard W, Obert Donald E, Bonman J Michael, Jackson Eric W   +17 more
doaj   +1 more source

Comparing the performances of SSR and SNP markers for population analysis in Theobroma cacao L., as alternative approach to validate a new ddRADseq protocol for cacao genotyping.

PLoS ONE
Proper cacao (Theobroma cacao L.) plant genotyping is mandatory for the conservation and use of the species genetic resources. A set of 15 international standard SSR markers was assumed as universal cacao genotyping system.
Angel Rafael Ramirez-Ramirez, Igor Bidot-Martínez, Khaled Mirzaei, Onisoa Léa Rasoamanalina Rivo, Miguel Menéndez-Grenot, Pablo Clapé-Borges, Georgina Espinosa-Lopez, Pierre Bertin   +7 more
doaj   +1 more source