Frontiers in Plant ScienceGenome-wide Association Studies (GWAS) identify genome variations related to specific phenotypes using Single Nucleotide Polymorphism (SNP) markers. Genotyping platforms like SNP-Array or sequencing-based techniques (GBS) can genotype samples with many ...
Fernanda Carla Ferreira de Pontes +6 more
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Highly-multiplexed SNP genotyping for genetic mapping and germplasm diversity studies in pea
BMC Genomics, 2010 Background Single Nucleotide Polymorphisms (SNPs) can be used as genetic markers for applications such as genetic diversity studies or genetic mapping. New technologies now allow genotyping hundreds to thousands of SNPs in a single reaction.
Deulvot Chrystel +7 more
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Confronting two-pair primer design for enzyme-free SNP genotyping based on a genetic algorithm
BMC Bioinformatics, 2010 Background Polymerase chain reaction with confronting two-pair primers (PCR-CTPP) method produces allele-specific DNA bands of different lengths by adding four designed primers and it achieves the single nucleotide polymorphism (SNP) genotyping by ...
Chuang Li-Yeh +3 more
doaj +1 more source
Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds [PDF]
, 2017 Robert Schaefer +34 more
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SNP high-throughput screening in grapevine using the SNPlex™ genotyping system
BMC Plant Biology, 2008 Background Until recently, only a small number of low- and mid-throughput methods have been used for single nucleotide polymorphism (SNP) discovery and genotyping in grapevine (Vitis vinifera L.).
Velasco Riccardo +6 more
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Rapid Detection of Rare Deleterious Variants by Next Generation Sequencing with Optional Microarray SNP Genotype Data [PDF]
, 2015 Christopher M. Watson +10 more
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SNP Typing of Mycobacterium leprae Clinical Strains in Côte d'Ivoire Reveals Genotype 4 Circulating [PDF]
, 2021 Amon Aby Christiane +7 more
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Haplotype Block Partitioning and Tag SNP Selection Using Genotype Data and Their Applications to Association Studies [PDF]
, 2004 Kui Zhang +5 more
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LD-Spline: Mapping SNPs on genotyping platforms to genomic regions using patterns of linkage disequilibrium [PDF]
, 2009 William S. Bush +3 more
openalex +1 more source
Accurate Cultivar Authentication of Jujube Fruits Using Nano-Fluidic Genotyping of Single Nucleotide Polymorphism (SNP) Markers [PDF]
, 2022 Yue Zhang +5 more
openalex +1 more source