Results 81 to 90 of about 2,419,482 (289)

Soil indigenous microbiome and plant genotypes cooperatively modify soybean rhizosphere microbiome assembly

BMC Microbiology, 2019
Background Plants have evolved intimate interactions with soil microbes for a range of beneficial functions including nutrient acquisition, pathogen resistance and stress tolerance.
Fang Liu, Tarek Hewezi, Sarah L. Lebeis, Vince Pantalone, Parwinder S. Grewal, Margaret E. Staton   +5 more
doaj   +1 more source

Soil microbiome interventions for carbon sequestration and climate mitigation

mSystems
Mitigating climate change in soil ecosystems involves complex plant and microbial processes regulating carbon pools and flows. Here, we advocate for the use of soil microbiome interventions to help increase soil carbon stocks and curb greenhouse gas ...
Gwyn A. Beattie, Anna Edlund, N. Esiobu, Jack A. Gilbert, M. Nicolaisen, J. Jansson, Paul R. Jensen, Marco Keiluweit, Jay T. Lennon, Jennifer Martiny, Vanessa R. Minnis, D. Newman, R. Peixoto, C. Schadt, J. R. van der Meer   +14 more
semanticscholar   +1 more source

Interactive effects of depth and differential irrigation on soil microbiome composition and functioning

Frontiers in Microbiomes, 2023
Two factors that are well-known to influence soil microbiomes are the depth of the soil as well as the level of moisture. Previous works have demonstrated that climate change will increase the incidence of drought in soils, but it is unknown how ...
D. Naylor, Katherine Naasko, Montana L Smith, Sneha P. Couvillion, C. Nicora, Jesse B. Trejo, S. Fransen, Robert Danczak, Ryan Mcclure, K. Hofmockel, J. Jansson   +10 more
semanticscholar   +1 more source

Rainfall Shapes the Diversity of Soil Nitrogen‐Fixing Microorganisms Worldwide

Advanced Science, EarlyView.
This study reveals the distinctive pattern and mechanism of rainfall driving the global biodiversity and biogeography of soil potential N‐fixing microorganisms, and constructs the theoretical framework. The results guide us on how to maintain ecosystem productivity under future climate changes (e.g., whether a specific region needs more N fertilizers ...
Bin Hua, Shuang Pang, Ang Li, Zonghao Hu, Honghui Wu, Shuhan Zhang, Yi Fan, Yi Wu, Wei Yang, Yachao Zhao, Yupeng Guan, Baoming Ji, Deliang Kong, Yong Zhao, Anton A. Goncharov, Anastasia Yu. Korotkevich, Rong Mao, Yang Zhang, Ximei Zhang   +18 more
wiley   +1 more source

Culturomics- and metagenomics-based insights into the soil microbiome preservation and application for sustainable agriculture

Frontiers in Microbiology
Soil health is crucial for global food production in the context of an ever-growing global population. Microbiomes, a combination of microorganisms and their activities, play a pivotal role by biodegrading contaminants, maintaining soil structure ...
Elisa Clagnan, Manuela Costanzo, Andrea Visca, L. Di Gregorio, S. Tabacchioni, E. Colantoni, F. Sevi, Federico Sbarra, Arianna Bindo, Lorenzo Nolfi, R. Magarelli, Mario Trupo, A. Ambrico, A. Bevivino   +13 more
semanticscholar   +1 more source

Can Nanomaterials Improve the Soil Microbiome and Crop Productivity?

Agriculture, 2023
Global issues such as soil deterioration, pollution, and soil productivity loss induced by industrialization and intensive agriculture pose a serious danger to agricultural production and sustainability. Numerous technical breakthroughs have been applied
V. Rajput, A. Kumari, S. K. Upadhyay, T. Minkina, S. Mandzhieva, Anuj Ranjan, S. Sushkova, M. Burachevskaya, Priyadarshani Rajput, E. Konstantinova, Jagpreet Singh, K. Verma   +11 more
semanticscholar   +1 more source

Oligosaccharides With Defined Glycosidic Bonds Shape Gut Microbial Succession and Metabolism Via Bond‐Specific Microbial Responders

Advanced Science, EarlyView.
Oligosaccharides with defined glycosidic bonds drive divergent gut microbial succession and shape unique metabolic profiles. Absolute time‐series profiling with Bayesian generalized Lotka–Volterra modeling identifies bond‐specific microbial responders, while monoculture validation and metaproteomics reveal linkage‐matched transport and cleavage modules.
Xiaoxuan Lu, Jiaqi Zou, Geng Han, Mengyao Zhao, Ting Luo, Xiangru Feng, Liangliang Zhu, Yijia Chen, Xiaoguo Ji, Jiayang Jin, Liming Zhao   +10 more
wiley   +1 more source

Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming

Microbiome, 2018
Harnessing beneficial microbes presents a promising strategy to optimize plant growth and agricultural sustainability. Little is known to which extent and how specifically soil and plant microbiomes can be manipulated through different cropping practices.
K. Hartman, M. V. D. van der Heijden, R. Wittwer, Samiran Banerjee, J. Walser, Klaus Schlaeppi   +5 more
semanticscholar   +1 more source

Harnessing Large Language Models to Advance Microbiome Research: From Sequence Analysis to Clinical Applications

Advanced Intelligent Discovery, EarlyView.
Large language models are transforming microbiome research by enabling advanced sequence profiling, functional prediction, and association mining across complex datasets. They automate microbial classification and disease‐state recognition, improving cross‐study integration and clinical diagnostics.
Jieqi Xing, He Wang, Yangyang Sun, Xiaoquan Su, Shunyao Wu   +4 more
wiley   +1 more source

Agricultural practices influence soil microbiome assembly and interactions at different depths identified by machine learning

Communications Biology
Agricultural practices affect soil microbes which are critical to soil health and sustainable agriculture. To understand prokaryotic and fungal assembly under agricultural practices, we use machine learning-based methods. We show that fertility source is
Yujie Mo, Raven L. Bier, Xiaoli Li, M. Daniels, Andrew H. Smith, Lei Yu, Jin-Jun Kan   +6 more
semanticscholar   +1 more source