Results 31 to 40 of about 1,350 (116)

Sorting by Weighted Reversals, Transpositions, and Inverted Transpositions [PDF]

Journal of Computational Biology, 2006
During evolution, genomes are subject to genome rearrangements that alter the ordering and orientation of genes on the chromosomes. If a genome consists of a single chromosome (like mitochondrial, chloroplast, or bacterial genomes), the biologically relevant genome rearrangements are (1) inversions--also called reversals--where a section of the genome ...
Martin Bader, Enno Ohlebusch
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(1+ε)-Approximation of Sorting by Reversals and Transpositions

Theoretical Computer Science, 2001
zbMATH Open Web Interface contents unavailable due to conflicting licenses.
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Sorting by Restricted-Length-Weighted Reversals

Genomics, Proteomics & Bioinformatics, 2005
Abstract Classical sorting by reversals uses the unit-cost model, that is, each reversal consumes an equal cost. This model limits the biological meaning of sorting by reversal. Bender and his colleagues extended it by assigning a cost function f(l) = lα for all α ≥ 0, where l is the length of the reversed subsequence.
Nguyen, Thach Cam, Ngo, Hieu Trung, Nguyen, Nguyen Bao   +2 more
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Genomic sorting with length-weighted reversals.

Genome informatics. International Conference on Genome Informatics, 2002
Current algorithmic studies of genome rearrangement ignore the length of reversals (or inversions); rather, they only count their number. We introduce a new cost model in which the lengths of the reversed sequences play a role, allowing more flexibility in accounting for mutation phenomena.
Pinter, Ron Y., Skiena, Steven
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Quantum routing with fast reversals. [PDF]

Quantum (Vienna), 2021
Bapat A, Childs AM, Gorshkov AV, King S, Schoute E, Shastri H.   +5 more
europepmc   +1 more source

Spatial richness of neural magnetic fields. [PDF]

PLoS Comput Biol
Ali Z, Poon ASY.
europepmc   +1 more source

Approximation algorithm for rearrangement distances considering repeated genes and intergenic regions. [PDF]

Algorithms Mol Biol, 2021
Siqueira G, Alexandrino AO, Oliveira AR, Dias Z.   +3 more
europepmc   +1 more source

Orbitofrontal-Hippocampal State Coding Dynamics during Reversal Learning. [PDF]

J Neurosci
Sanchez AN, Ford CF, Balewski ZZ, Wallis JD.   +3 more
europepmc   +1 more source

Temporal dynamics of cognitive functioning in people with Parkinson's disease. [PDF]

NPJ Parkinsons Dis
Scharfenberg D, Kalbe E, Ophey A, Balzer-Geldsetzer M, Berg D, Hilker-Roggendorf R, Kassubek J, Liepelt-Scarfone I, Mollenhauer B, Reetz K, Riedel O, Roeske S, Schulz JB, Storch A, Trenkwalder C, Witt K, Dodel R, Deserno MK.   +17 more
europepmc   +1 more source

Subdomains of executive function correlate with accuracy on a change detection task. [PDF]

Psychon Bull Rev
Norman A, Conduit R, Laycock R, Robinson SR.   +3 more
europepmc   +1 more source