Results 21 to 30 of about 1,347 (156)

SIP-SRS Imaging of Cell Wall Synthesis Identifies a Synergy between Micafungin and Amphotericin B. [PDF]

open access: yesAdv Sci (Weinh)
We employed glucose‐d7–based stable isotope probe‐assisted SRS microscopy (SIP‐SRS) C–D imaging to visualize fungal cell wall synthesis and remodeling under antifungal treatment. Amphotericin B (AmB) induced notable daughter cell wall thickening, prompting a combinational therapy with AmB and micafungin.
Zhang M   +6 more
europepmc   +2 more sources

Autochthonous bioaugmentation with non-direct degraders: A new strategy to enhance wastewater bioremediation performance

open access: yesEnvironment International, 2020
Autochthonous bioaugmentation (ABA) strategies are primarily carried out using a single, highly efficient type of bacteria that is capable of directly degrading the target compound. However, no studies have examined the use of non-direct degraders (NDDs),
Jibing Li   +6 more
doaj   +1 more source

Characterization of diazotrophic root endophytes in Chinese silvergrass (Miscanthus sinensis)

open access: yesMicrobiome, 2022
Background Phytoremediation is a potentially cost-effective way to remediate highly contaminated mine tailing sites. However, nutrient limitations, especially the deficiency of nitrogen (N), can hinder the growth of plants and impair the phytoremediation
Yongbin Li   +13 more
doaj   +1 more source

Identification of dominant sulfamethoxazole-degraders in pig farm-impacted soil by DNA and protein stable isotope probing

open access: yesEnvironment International, 2019
Increasing introduction of antibiotic residues from humans and animal farming into the environment impacts the functioning of natural ecosystems and significantly contributes to the propagation of antibiotic resistance. Microbial degradation is the major
Wei-Ying Ouyang   +3 more
doaj   +1 more source

Measurement Error and Resolution in Quantitative Stable Isotope Probing: Implications for Experimental Design

open access: yesmSystems, 2020
Quantitative stable isotope probing (qSIP) estimates isotope tracer incorporation into DNA of individual microbes and can link microbial biodiversity and biogeochemistry in complex communities. As with any quantitative estimation technique, qSIP involves
Ella T. Sieradzki   +11 more
doaj   +1 more source

Exploring novel alkane-degradation pathways in uncultured bacteria from the North Atlantic Ocean

open access: yesmSystems, 2023
Microbes play a significant role in the degradation of petroleum hydrocarbons in the oceans, yet little is known about the native bacteria that metabolize hydrocarbons before an oil spill.
Mirna Vázquez Rosas Landa   +6 more
doaj   +1 more source

Stable isotope phenotyping via cluster analysis of NanoSIMS data as a method for characterizing distinct microbial ecophysiologies and sulfur-cycling in the environment

open access: yesFrontiers in Microbiology, 2016
Stable isotope probing (SIP) is a valuable tool for gaining insights into ecophysiology and biogeochemical cycling of environmental microbial communities by tracking isotopically labeled compounds into cellular macromolecules as well as into byproducts ...
Katherine S Dawson   +3 more
doaj   +1 more source

Protein-based stable isotope probing (Protein-SIP) reveals active species within anoxic mixed cultures [PDF]

open access: yesThe ISME Journal, 2008
Abstract It is still a challenge to link specific metabolic activities to certain species in a microbial community because of methodological limitations. We developed a method to analyze the specific metabolic activity of a single bacterial species within a consortium making use of [13C7]-toluene for metabolic labelling of proteins ...
Nico, Jehmlich   +4 more
openaire   +2 more sources

Stable isotope switching (SIS): a new stable isotope probing (SIP) approach to determine carbon flow in the soil food web and dynamics in organic matter pools [PDF]

open access: yesRapid Communications in Mass Spectrometry, 2012
RATIONALE Recent advances in stable isotope probing (SIP) have allowed direct linkage of microbial population structure and function. This paper details a new development of SIP, Stable Isotope Switching (SIS), which allows the simultaneous assessment of carbon (C) uptake, turnover and decay, and the elucidation
Maxfield, Peter J   +4 more
openaire   +4 more sources

The presence of in situ sulphamethoxazole degraders and their interactions with other microbes in activated sludge as revealed by DNA stable isotope probing and molecular ecological network analysis

open access: yesEnvironment International, 2019
Wastewater treatment plants (WWTPs) are the main hotspots for the release of antibiotics, including the widely used sulphonamides. Microbes play important roles in eliminating sulphonamides in WWTPs, and knowledge about these degraders and their ...
Mengke Song   +7 more
doaj   +1 more source

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