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Protein Structure Modeling with MODELLER
2008Genome sequencing projects have resulted in a rapid increase in the number of known protein sequences. In contrast, only about one-hundredth of these sequences have been characterized using experimental structure determination methods. Computational protein structure modeling techniques have the potential to bridge this sequence-structure gap.
Narayanan, Eswar +4 more
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Constraints, 2001
zbMATH Open Web Interface contents unavailable due to conflicting licenses.
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zbMATH Open Web Interface contents unavailable due to conflicting licenses.
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Modeling the structure of the ribosome
Biochemistry and Cell Biology, 1995Considering the size and complexity of the ribosome and the growing body of data from a wide range of experiments on ribosomal structure, it is becoming increasingly important to develop tools that facilitate the development of reliable models for the ribosome.
Easterwood, Thomas R. +1 more
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The Structure of Structured Bond Portfolio Models
Operations Research, 1992Over the past decade, optimization models have been widely used to help select bond portfolios. Several different formulations are popular. The purposes of this paper are to clarify the basic structures of the models, to explain the relationships among them, and to assess their strengths and weaknesses.
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Structural models of psychopathy
Current Psychiatry Reports, 2005Psychopathy traditionally is defined by a cluster of inferred personality traits and socially deviant behaviors. The accepted standard for the reliable and valid assessment of psychopathy is the Psychopathy Checklist-Revised (PCL-R). Because of its importance in basic and applied research, and in the mental health and criminal justice systems, the PCL ...
Robert D, Hare, Craig S, Neumann
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1992
For a molecule of biological importance, one expects a strong correlation between the three-dimensional structure and its biological function(s). Molecular simulations allow the prediction of physical properties of macromolecules. Many of these properties are closely related to the molecular structure.
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For a molecule of biological importance, one expects a strong correlation between the three-dimensional structure and its biological function(s). Molecular simulations allow the prediction of physical properties of macromolecules. Many of these properties are closely related to the molecular structure.
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Structure prediction and modelling
Current Opinion in Biotechnology, 1991Protein structure prediction from sequence remains a major goal in molecular biology. The methods described in this review concentrate on deriving structural information through the detection of similarities between a test sequence and a database of known structures. Such methods are often referred to as knowledge-based strategies reflecting the use of
M B, Swindells, J M, Thornton
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2004 International Conference on Image Processing, 2004. ICIP '04., 2005
A hierarchical framework for the recognition of complex deformable shapes is developed. In extension to traditional approaches an additional layer of control is introduced to guide the local search for subshapes. This is realized by incorporating knowledge about their spatial relationships.
Steven Bergner +2 more
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A hierarchical framework for the recognition of complex deformable shapes is developed. In extension to traditional approaches an additional layer of control is introduced to guide the local search for subshapes. This is realized by incorporating knowledge about their spatial relationships.
Steven Bergner +2 more
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IFAC Proceedings Volumes, 1988
Abstract Models of various kinds are important in control engineering. It is unfortunately often a time-consuming and difficult task to develop a model. The objective of this paper is to discuss how reuse of models in different contexts could be supported by imposing structure on models and by supporting flexibility and building of model libraries ...
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Abstract Models of various kinds are important in control engineering. It is unfortunately often a time-consuming and difficult task to develop a model. The objective of this paper is to discuss how reuse of models in different contexts could be supported by imposing structure on models and by supporting flexibility and building of model libraries ...
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2010
The tertiary structure of proteins can reveal information that is hard to detect in a linear sequence. Knowing the tertiary structure is valuable when generating hypothesis and interpreting data. Unfortunately, the gap between the number of known protein sequences and their associated structures is widening.
Lars, Malmström, David R, Goodlett
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The tertiary structure of proteins can reveal information that is hard to detect in a linear sequence. Knowing the tertiary structure is valuable when generating hypothesis and interpreting data. Unfortunately, the gap between the number of known protein sequences and their associated structures is widening.
Lars, Malmström, David R, Goodlett
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