Subtype‐specific enhancer RNAs define transcriptional regulators and prognosis in breast cancers
This study employed machine learning methodologies to perform the subtype‐specific classification of RNA‐seq data sets, which are mapped on enhancers from TCGA‐derived breast cancer patients. Their integration with gene expression (referred to as ProxCReAM eRNAs) and chromatin accessibility profiles has the potential to identify lineage‐specific and ...
Aamena Y. Patel +6 more
wiley +1 more source
The low carbon transition in the UK building sector must make financial sense: a hybrid system dynamics bottom up modelling framework [PDF]
The building sector contributes significantly to global energy consumption and CO2 emissions. It is urgent to reduce them through the retrofit of existing buildings and improved new building designs.
Papachristos, George
core
Dimethyl fumarate (DMF) reduces growth of HPV‐positive cervical cancer spheroids and induces ferroptosis in cervical cancer cells via blocking SLC7A11/Glutathione (GSH) axis. Combination of subcytotoxic doses of DMF and cisplatin (CDDP) further suppresses spheroid growth and drives cell death in 2D culture models.
Carolina Punziano +6 more
wiley +1 more source
A knowledge intervention to explore stakeholders’ understanding of a dynamic coastal nature reserve
As quantitative modelling can be used to build stakeholder understanding for management decisions, and can help build consensus (Stave, 2003), a system dynamics modelling study of the abiotic dynamics of an archetypical small estuary, the Slufter in the ...
Goessen, P. (author) +11 more
core
Using system dynamics modelling to assess the economic efficiency of innovations in the public sector - a systematic review. [PDF]
Jadeja N +5 more
europepmc +1 more source
Tumors contain diverse cellular states whose behavior is shaped by context‐dependent gene coordination. By comparing gene–gene relationships across biological contexts, we identify adaptive transcriptional modules that reorganize into distinct vulnerability axes.
Brian Nelson +9 more
wiley +1 more source
Lumped-Parameter Modelling of Cardiovascular System Dynamics under Different Healthy and Diseased Conditions [PDF]
Cardiovascular disease is the most common cause of death in the modern society, and research into the diagnosis and treatment of cardiovascular diseases is an urgent task.
Shi, Yubing
core
Optimizing Strategies for Improving Mental Health in Victoria, Australia during the COVID-19 Era: A System Dynamics Modelling Study. [PDF]
Vacher C +10 more
europepmc +1 more source
In recent years, carbon dioxide (CO2) emissions have increased at the fastest rates ever recorded. This is a trend that contradicts global efforts to stabilise greenhouse gas (GHG) concentrations and prevent long-term climate change.
Osama Jabr +3 more
doaj +1 more source
COMP–PMEPA1 axis promotes epithelial‐to‐mesenchymal transition in breast cancer cells
This study reveals that cartilage oligomeric matrix protein (COMP) promotes epithelial‐to‐mesenchymal transition (EMT) in breast cancer. We identify PMEPA1 (protein TMEPAI) as a novel COMP‐binding partner that mediates EMT via binding to the TSP domains of COMP, establishing the COMP–PMEPA1 axis as a key EMT driver in breast cancer.
Konstantinos S. Papadakos +6 more
wiley +1 more source

