Results 11 to 20 of about 671,203 (335)
Reconstruction Codes for DNA Sequences with Uniform Tandem-Duplication Errors [PDF]
International Symposium on Information Theory, 2019 DNA as a data storage medium has several advantages, including far greater data density compared to electronic media. We propose that schemes for data storage in the DNA of living organisms may benefit from studying the reconstruction problem, which is ...
Schwartz, Moshe, Yehezkeally, Yonatan
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FLT3 Internal Tandem Duplication [PDF]
Definitions, 2020 A genetic abnormality that arises from duplications of the juxtamembrane portion of the gene and results in constitutive activation of the FLT3 receptor tyrosine kinase protein in early hematopoietic progenitor cells.
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The Combinatorics of Tandem Duplication [PDF]
Discrete Applied Mathematics, 2015 Tandem duplication is an evolutionary process whereby a segment of DNA is replicated and proximally inserted. The different configurations that can arise from this process give rise to some interesting combinatorial questions.
Greenman, C +2 more
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The Tandem Duplication Distance Is NP-Hard [PDF]
, 2019 In computational biology, tandem duplication is an important biological phenomenon which can occur either at the genome or at the DNA level. A tandem duplication takes a copy of a genome segment and inserts it right after the segment - this can be ...
Lafond, Manuel, Zhu, Binhai, Zou, Peng
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An innovative full-size pathogenic tandem duplication mutation precise detection system based on next-generation sequencing [PDF]
Experimental Biology and MedicineAccurate identifying internal tandem duplication (ITD) mutation is indispensable for diagnosis and prognosis of acute myeloid leukemia (AML) patients, but specialized full-size detection tools are lacking. Therefore, we aimed to develop a reliable system
Li-Li Zhang +7 more
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Expression pattern divergence of duplicated genes in rice [PDF]
BMC Bioinformatics, 2009 Background Genome-wide duplication is ubiquitous during diversification of the angiosperms, and gene duplication is one of the most important mechanisms for evolutionary novelties.
Gao Ge +5 more
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Capacity and expressiveness of genomic tandem duplication [PDF]
2015 IEEE International Symposium on Information Theory (ISIT), 2015 The majority of the human genome consists of repeated sequences. An important type of repeated sequences common in the human genome are tandem repeats, where identical copies appear next to each other. For example, in the sequence $AGTC\underline{TGTG}C$, $TGTG$ is a tandem repeat, that may be generated from $AGTCTGC$ by a tandem duplication of length $
Siddharth Jain +2 more
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Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants
Genome Biology, 2019 Background The sharp increase of plant genome and transcriptome data provide valuable resources to investigate evolutionary consequences of gene duplication in a range of taxa, and unravel common principles underlying duplicate gene retention. Results We
Xin Qiao +7 more
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Estimation of duplication history under a stochastic model for tandem repeats
BMC Bioinformatics, 2019 Background Tandem repeat sequences are common in the genomes of many organisms and are known to cause important phenomena such as gene silencing and rapid morphological changes. Due to the presence of multiple copies of the same pattern in tandem repeats
Farzad Farnoud +2 more
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EqualTDRL: illustrating equivalent tandem duplication random loss rearrangements [PDF]
BMC Bioinformatics, 2018 Background To study the differences between two unichromosomal circular genomes, e.g., mitochondrial genomes, under the tandem duplication random loss (TDRL) rearrangement it is important to consider the whole set of potential TDRL rearrangement events ...
Tom Hartmann +2 more
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