Results 71 to 80 of about 90,014 (157)

Tandem repeat distribution of gene transcripts in three plant families

Genetics and Molecular Biology, 2009
Tandem repeats (microsatellites or SSRs) are molecular markers with great potential for plant genetic studies. Modern strategies include the transfer of these markers among widely studied and orphan species.
Luciano Carlos da Maia, Velci Queiróz de Souza, Mauricio Marini Kopp, Fernando Irajá Félix de Carvalho, Antonio Costa de Oliveira   +4 more
doaj  

Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains : a web-based resource

BMC Bioinformatics, 2004
Background Polymorphic tandem repeat typing is a new generic technology which has been proved to be very efficient for bacterial pathogens such as B. anthracis, M. tuberculosis, P. aeruginosa, L. pneumophila, Y. pestis.
Vergnaud Gilles, Denœud France
doaj  

Tandem repeats discovery service (TReaDS) applied to finding novel cis-acting factors in repeat expansion diseases

BMC Bioinformatics, 2012
Background Tandem repeats are multiple duplications of substrings in the DNA that occur contiguously, or at a short distance, and may involve some mutations (such as substitutions, insertions, and deletions).
Pellegrini Marco, Renda Maria Elena, Vecchio Alessio   +2 more
doaj   +1 more source

Totally Mutant Telomeres: Single-Step Mutagenesis of Tandem Repeat DNA Sequences

BioTechniques, 2001
Dana Hager Underwood, Michael J. McEachern   +1 more
doaj   +1 more source

MIDAS: Computer application for the identification of exact and inaccurate microsatellites in genomic sequences

Revista Cubana de Informática Médica, 2019
Microsatellites are tandem repeat, frequent and diverse short sequences in the genomes of all species, constituting important markers in multiple areas of genomics-based research.
Carlos M. Martínez Ortiz
doaj  

TRFill: synergistic use of HiFi and Hi-C sequencing enables accurate assembly of tandem repeats for population-level analysis

Genome Biology
The highly repetitive content of eukaryotic genomes, including long tandem repeats, segmental duplications, and centromeres, makes haplotype-resolved genome assembly hard. Repeat sequences introduce gaps or mis-joins in the assemblies.
Huaming Wen, Jinbao Yang, Xianjia Zhao, Xingbin Wang, Jiawei Lei, Yanchun Li, Wenjie Du, Dongxi Li, Yun Xu, Stefano Lonardi, Weihua Pan   +10 more
doaj   +1 more source

Self-Assembled Porphyrazine Nucleosides on DNA Templates: Highly Fluorescent Chromophore Arrays and Sizing Forensic Tandem Repeat Sequences. [PDF]

European J Org Chem, 2018
Ishutkina MV, Berry AR, Hussain R, Khelevina OG, Siligardi G, Stulz E.   +5 more
europepmc   +1 more source

Epidemiology and Azole Resistance of Clinical Isolates of Aspergillus fumigatus from a Large Tertiary Hospital in Ningxia, China

Infection and Drug Resistance
Yuting Kang,1,* Qiujie Li,2,* Yao Yao,3 Chao Xu,2 Zhuoran Qiu,2 Wei Jia,1,3 Gang Li,1,3 Pengtao Wang1 1Ningxia Key Laboratory of Clinical and Pathogenic Microbiology, Institute of Medical Sciences, General Hospital of Ningxia Medical University ...
Kang Y, Li Q, Yao Y, Xu C, Qiu Z, Jia W, Li G, Wang P   +7 more
doaj  

Genetic sequence-based prediction of long-range chromatin interactions suggests a potential role of short tandem repeat sequences in genome organization. [PDF]

BMC Bioinformatics, 2017
Nikumbh S, Pfeifer N.
europepmc   +1 more source

Identifying associations between short tandem repeat sequences and gene expression in yeast reveals specific repeated motifs encoding transcriptional regulatory proteins. [PDF]

Comput Struct Biotechnol J
Yu Z, Liang Y, Xiang M, Xu K, Xu X, Ran D, Luo Y, Chen B, Bo X, Chen H.   +9 more
europepmc   +1 more source