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Biomarkers of Tumor Heterogeneity in Glioblastoma Multiforme Cohort of TCGA [PDF]
Cancers, 2023 Tumor Whole Slide Images (WSI) are often heterogeneous, which hinders the discovery of biomarkers in the presence of confounding clinical factors. In this study, we present a pipeline for identifying biomarkers from the Glioblastoma Multiforme (GBM) cohort of WSIs from TCGA archive. The GBM cohort endures many technical artifacts while the discovery of
Garrett Winkelmaier +4 more
openaire +3 more sources
International Journal of General Medicine, 2022 Jianpeng Li,1– 3,* Jinlong Cao,1– 3,* Pan Li,1– 3 Ran Deng,1– 3 Zhiqiang Yao,1– 3 Lijun Ying,1– 3 Junqiang Tian1– 3 1Department of Urology, The Second Hospital of Lanzhou University, Lanzhou, People’s Republic of China; 2Key Laboratory of Gansu ...
Li J +6 more
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A Newly Defined Pyroptosis-Related Gene Signature for the Prognosis of Bladder Cancer
International Journal of General Medicine, 2021 Weikang Chen,1,* Wenhao Zhang,2,3,* Tao Zhou,1,* Jian Cai,1 Zhixian Yu,1 Zhigang Wu1 1Department of Urology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, Zhejiang, 325000, People’s Republic of China; 2The Fourth ...
Chen W +5 more
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OncoImmunology, 2020 Antibodies targeting the co-inhibitory receptor programmed cell death 1 (PDCD1, best known as PD-1) or its main ligand CD274 (best known as PD-L1) have shown some activity in patients with metastatic triple-negative breast cancer (TNBC), especially in a ...
Karsten A. Pilones +7 more
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, 2022 https://tcga-survival.com Analysis code used in "Genome-wide identification and analysis of prognostic features in human cancers", https://doi.org/10.1016/j.celrep.2022 ...
Joan Smith
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Machine learning analysis of TCGA cancer data
PeerJ Computer Science, 2021 In recent years, machine learning (ML) researchers have changed their focus towards biological problems that are difficult to analyse with standard approaches. Large initiatives such as The Cancer Genome Atlas (TCGA) have allowed the use of omic data for the training of these algorithms.
Jose Liñares-Blanco +2 more
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Drug Design, Development and Therapy, 2022 Fei-Ran Yang,1,* Si-Yi Li,1,* Xi-Wen Hu,1 Xiu-Rong Li,2 Hui-Jie Li2 1College of First Clinical Medicine, Shandong University of Traditional Chinese Medicine, Jinan, Shandong, People’s Republic of China; 2Department of Oncology, Affiliated ...
Yang FR, Li SY, Hu XW, Li XR, Li HJ
doaj
Indian Journal of Ophthalmology, 2019 Purpose: The cancer genome atlas (TCGA) is a comprehensive project supported by the National Cancer Institute (NCI) in the United States to explore molecular alterations in cancer, including uveal melanoma (UM). This led to TCGA classification for UM. In
Carol L Shields +5 more
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Frontiers in Bioscience-Landmark, 2022 Background: In biomedical and epidemiological studies, gene-environment (G-E) interactions play an important role in the etiology and progression of many complex diseases.
Jie-Huei Wang, Chun-Ting Yang
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, 2022 This is the SNP data downloaded from Xena public ...
Jarrett Lio (12704033)
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