Results 61 to 70 of about 1,562,873 (242)

Transcription factors and asthma [PDF]

open access: yesEuropean Respiratory Journal, 1998
Asthma is characterized by the expression of multiple genes for inflammatory proteins, such as cytokines, enzymes, receptors and adhesion molecules. This is orchestrated by transcription factors, which are proteins that bind to the promoter regions of these genes and may be activated by inflammatory stimuli, such as cytokines.
Ian M. Adcock, Peter J. Barnes
openaire   +3 more sources

The transcription factor C/EBP-β mediates constitutive and LPS-inducible transcription of murine SerpinB2. [PDF]

open access: yesPLoS ONE, 2013
SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stimuli and is linked to the modulation of innate immunity, macrophage survival, and inhibition of plasminogen activators ...
Ekemini A Udofa   +6 more
doaj   +1 more source

Fundamental Dynamic Units: Feedforward Networks and Adjustable Gates [PDF]

open access: yesarXiv, 2009
The activation/repression of a given gene is typically regulated by multiple transcription factors (TFs) that bind at the gene regulatory region and recruit RNA polymerase (RNAP). The interactions between the promoter region and TFs and between different TFs specify the dynamic responses of the gene under different physiological conditions. By choosing
arxiv  

Non-equilibrium dynamics of gene expression and the Jarzynski equality [PDF]

open access: yes, 2007
In order to express specific genes at the right time, the transcription of genes is regulated by the presence and absence of transcription factor molecules. With transcription factor concentrations undergoing constant changes, gene transcription takes place out of equilibrium.
arxiv   +1 more source

The primary σ factor in Escherichia coli can access the transcription elongation complex from solution in vivo

open access: yeseLife, 2015
The σ subunit of bacterial RNA polymerase (RNAP) confers on the enzyme the ability to initiate promoter-specific transcription. Although σ factors are generally classified as initiation factors, σ can also remain associated with, and modulate the ...
Seth R Goldman   +4 more
doaj   +1 more source

Unsupervised learning of transcriptional regulatory networks via latent tree graphical models [PDF]

open access: yesarXiv, 2016
Gene expression is a readily-observed quantification of transcriptional activity and cellular state that enables the recovery of the relationships between regulators and their target genes. Reconstructing transcriptional regulatory networks from gene expression data is a problem that has attracted much attention, but previous work often makes the ...
arxiv  

A mouse tissue transcription factor atlas

open access: yesNature Communications, 2017
While we have abundant data for transcription factor (TF) binding sites and TF expression at the mRNA level, our knowledge of TFs at the protein level and their DNA-binding activities is sparser.
Quan Zhou   +10 more
doaj   +1 more source

MYB transcription factor PdMYB118 directly interacts with bHLH transcription factor PdTT8 to regulate wound-induced anthocyanin biosynthesis in poplar

open access: yesBMC Plant Biology, 2020
Background R2R3-MYB transcription factors (TFs) play important roles in plant growth and development, and response to biotic and abiotic stresses. However, their regulatory mechanisms in wound-induced anthocyanin biosynthesis in woody plants are largely ...
Haihai Wang   +5 more
doaj   +1 more source

Transcription Factor Binding to Replicated DNA

open access: yesCell Reports, 2020
Summary: Genome replication perturbs the DNA regulatory environment by displacing DNA-bound proteins, replacing nucleosomes, and introducing dosage imbalance between regions replicating at different S-phase stages.
Raz Bar-Ziv   +3 more
doaj  

Removing Background Co-occurrences of Transcription Factor Binding Sites Greatly Improves the Prediction of Specific Transcription Factor Cooperations

open access: yesFrontiers in Genetics, 2018
Today, it is well-known that in eukaryotic cells the complex interplay of transcription factors (TFs) bound to the DNA of promoters and enhancers is the basis for precise and specific control of transcription.
Cornelia Meckbach   +4 more
doaj   +1 more source

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