Unraveling the viral dark matter through viral metagenomics [PDF]
Frontiers in Immunology, 2022 Viruses are part of the microbiome and have essential roles in immunology, evolution, biogeochemical cycles, health, and disease progression. Viruses influence a wide variety of systems and processes, and the continued discovery of novel viruses is ...
Tasha M. Santiago-Rodriguez +1 more
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Enhanced Viral Metagenomics with Lazypipe 2 [PDF]
Viruses, 2023 Viruses are the main agents causing emerging and re-emerging infectious diseases. It is therefore important to screen for and detect them and uncover the evolutionary processes that support their ability to jump species boundaries and establish ...
Ilya Plyusnin +4 more
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Viral Metagenomics as a Tool to Track Sources of Fecal Contamination: A One Health Approach [PDF]
Viruses, 2023 The One Health framework recognizes that human, animal, and environmental health are linked and highly interdependent. Fecal contamination of water, soil, foodstuff, and air may impact many aspects of One Health, and culture, PCR-based, and sequencing ...
Tasha M. Santiago-Rodriguez +1 more
doaj +3 more sources
Viral Metagenomics for Identification of Emerging Viruses in Transfusion Medicine [PDF]
Viruses, 2022 Viral metagenomics has revolutionized our understanding for identification of unknown or poorly characterized viruses. For that reason, metagenomic studies gave been largely applied for virus discovery in a wide variety of clinical samples, including ...
Svetoslav Nanev Slavov
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Viral metagenomics of the gut virome of diarrheal children with Rotavirus A infection. [PDF]
Gut Microbes, 2023 Diarrhea is a leading cause of morbidity and mortality in children worldwide and represents a major dysbiosis event. Rotavirus has been recognized as a global leading pathogen of diarrhea.
Bao S +16 more
europepmc +4 more sources
Viral Metagenomics for the Identification of Emerging Infections in Clinical Samples with Inconclusive Dengue, Zika, and Chikungunya Viral Amplification [PDF]
Viruses, 2022 Viral metagenomics is increasingly being used for the identification of emerging and re-emerging viral pathogens in clinical samples with unknown etiology.
Juliana Vanessa Cavalcante Souza +15 more
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Viral metagenomics reveals diverse virus-host interactions throughout the soil depth profile. [PDF]
mBio, 2023 Soil microbes play pivotal roles in global carbon cycling; however, the fundamental interactions between microbes and their infecting viruses remain unclear.
Muscatt G +4 more
europepmc +2 more sources
Evaluation of Methods for the Concentration and Extraction of Viruses from Sewage in the Context of Metagenomic Sequencing. [PDF]
PLoS ONE, 2017 Viral sewage metagenomics is a novel field of study used for surveillance, epidemiological studies, and evaluation of waste water treatment efficiency. In raw sewage human waste is mixed with household, industrial and drainage water, and virus particles ...
Mathis Hjort Hjelmsø +12 more
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Microbiome, 2019 Background Mosquitoes are the most important invertebrate viral vectors in humans and harbor a high diversity of understudied viruses, which has been shown in many mosquito virome studies in recent years.
Chenyan Shi +7 more
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Viral metagenomics combined with metabolomics reveals the role of gut viruses in mouse model of depression. [PDF]
Front Microbiol, 2022 Depression is a heterogeneous mental disorder that has been linked to disturbances in the gut microbiome. As an essential part of the gut microbiome, gut virome may play critical roles in disease progression and development.
Duan J, Wang W, Jiang T, Bai X, Liu C.
europepmc +2 more sources