Results 31 to 40 of about 30,780 (255)

Novel hemotropic mycoplasmas are widespread and genetically diverse in vampire bats [PDF]

open access: yes, 2017
Bats (Order: Chiroptera) have been widely studied as reservoir hosts for viruses of concern for human and animal health. However, whether bats are equally competent hosts of non-viral pathogens such as bacteria remains an important open question. Here,
Altizer, S.M.   +7 more
core   +1 more source

Viruses in Horses with Neurologic and Respiratory Diseases. [PDF]

open access: yes, 2019
Metagenomics was used to identify viral sequences in the plasma and CSF (cerobrospinal fluid) of 13 horses with unexplained neurological signs and in the plasma and respiratory swabs of 14 horses with unexplained respiratory signs. Equine hepacivirus and
Altan, Eda   +7 more
core   +1 more source

Integrating Viral Metagenomics into an Ecological Framework [PDF]

open access: yesAnnual Review of Virology, 2021
Viral metagenomics has expanded our knowledge of the ecology of uncultured viruses, within both environmental (e.g., terrestrial and aquatic) and host-associated (e.g., plants and animals, including humans) contexts. Here, we emphasize the implementation of an ecological framework in viral metagenomic studies to address questions in virology rarely ...
Pacifica, Sommers   +3 more
openaire   +2 more sources

Unbiased Metagenomic Sequencing for Pediatric Meningitis in Bangladesh Reveals Neuroinvasive Chikungunya Virus Outbreak and Other Unrealized Pathogens. [PDF]

open access: yes, 2019
The burden of meningitis in low-and-middle-income countries remains significant, but the infectious causes remain largely unknown, impeding institution of evidence-based treatment and prevention decisions.
Crawford, Emily D.   +25 more
core   +2 more sources

MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies. [PDF]

open access: yesPLoS ONE, 2016
Metagenomics, the sequence characterization of all genomes within a sample, is widely used as a virus discovery tool as well as a tool to study viral diversity of animals.
Martin Norling   +4 more
doaj   +1 more source

Whole Genome Analysis of Selected Human Group A Rotavirus Strains Revealed Evolution of DS-1-Like Single- and Double-Gene Reassortant Rotavirus Strains in Pakistan During 2015–2016

open access: yesFrontiers in Microbiology, 2019
Acute gastroenteritis due to group A rotaviruses (RVAs) is the leading cause of infant and childhood morbidity and mortality particularly in developing countries including Pakistan.
Asma Sadiq   +4 more
doaj   +1 more source

An optimized methodology for whole genome sequencing of RNA respiratory viruses from nasopharyngeal aspirates [PDF]

open access: yes, 2018
Over the last decade, the number of viral genome sequences deposited in available databases has grown exponentially. However, sequencing methodology vary widely and many published works have relied on viral enrichment by viral culture or nucleic acid ...
Goya, Stephanie   +9 more
core   +2 more sources

Phages and human health: More than idle hitchhikers [PDF]

open access: yes, 2019
Bacteriophages, or phages, are viruses that infect bacteria and archaea. Phages have diverse morphologies and can be coded in DNA or RNA and as single or double strands with a large range of genome sizes. With the increasing use of metagenomic sequencing
Baldridge, Megan T   +2 more
core   +2 more sources

Onchocerciasis-associated epilepsy: an explorative case-control study with viral metagenomic analyses on Onchocerca volvulus [version 2; peer review: 2 approved]

open access: yesF1000Research, 2023
Background A high prevalence of onchocerciasis-associated epilepsy (OAE) has been observed in onchocerciasis-endemic areas with high ongoing Onchocerca volvulus transmission. However, the pathogenesis of OAE remains to be elucidated.
Robert Colebunders   +10 more
doaj   +1 more source

Characterizing Enterotypes in Human Metagenomics: A Viral Perspective [PDF]

open access: yesFrontiers in Microbiology, 2021
The diversity and high genomic mutation rates of viral species hinder our understanding of viruses and their contributions to human health. Viral enterotypes as a description of the gut virome, its characteristics have not been thoroughly studied. Here we investigated the human gut virome composition using previously published sequencing data of 2,690 ...
Li Song, Lu Zhang, Xiaodong Fang
openaire   +4 more sources

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