Results 121 to 130 of about 30,780 (255)
Diversity and structure of Poaceae-infecting mastreviruses communities on Reunion Island using a viral metagenomics-based approach [PDF]
, 2019 The Mastrevirus genus (Geminiviridae family) contains circular single-stranded DNA viruses transmitted by leafhoppers (in the Cicadellidae family) to a wide range of either monocotyledonous or dicotyledonous host species.
Claverie, Sohini +10 more
core
Iflaviruses in arthropods: when small is mighty
Insect Science, EarlyView.Many arthropod species harbor iflaviruses, which often cause covert (asymptomatic) infections, but may still affect host fitness. We review the impact of iflaviruses on arthropod fitness, immunity, behaviour as well as the iflavirus’ host range, transmission, tissue tropism and the interactions with other microorganisms within arthropods.
Annamaria Mattia +3 more
wiley +1 more source
Entamoeba and Giardia parasites implicated as hosts of CRESS viruses
Nature Communications, 2020 Metagenomics allows virus genome discovery, but the viral hosts are often not identified. Here, Kinsella et al. use recombination events between virus genomes, statistical association of viruses to hosts in clinical samples, and analysis of endogenous ...
Cormac M. Kinsella +8 more
doaj +1 more source
pylifemap: Mapping data onto the tree of life
Methods in Ecology and Evolution, EarlyView.Abstract The need to visualize data associated with NCBI Taxonomy Identifiers is growing in various biological fields ranging from comparative genomics to metagenomics and metabarcoding, and even for outreach. No tool today allows visualization of such data while still keeping the full vision of the whole taxonomy, possibly causing a biased view of the
Julien Barnier +5 more
wiley +1 more source
Annals of Applied Biology, EarlyView.This review highlights recent advances in understanding how plant protection programs and alternative fungicides affect the taxonomic composition of the grapevine phyllosphere microbiota. Bacterial and fungal communities are primarily shaped by the plant compartment, vineyard location, and sampling time. Plant protection programs generally have a minor
Sofia Montanari +6 more
wiley +1 more source
Downloading Viral Metagenome Data v1
, 2021 Downloading reads from the Ocean Sampling Day (2014) using fastq-dump, a tool from the SRA toolkit implemented in Cyverse.
openaire +1 more source
Infection control in the brain and the eye
Acta Ophthalmologica, EarlyView.Abstract The Central Nervous System (CNS), comprising the brain and the eye, is considered to have a ‘privileged’ mechanism for dealing with immunological challenge (immune privilege, IP). CNS IP has been revealed through experiments using foreign protein antigens and cell and tissue alloantigens (grafts), but evidence for a role for IP in modulating ...
John V. Forrester +2 more
wiley +1 more source
Improvement of three nucleic acid isolation protocols for an overall diagnosis of viruses on six vegetative propagated plants [PDF]
, 2013 Biological Resources Center (BRCs) must be able to guarantee the sanitary status of the resources they distribute, in order to prevent the spread or emergence of diseases.
Bernardo, Pauline +8 more
core
Alimentary Pharmacology &Therapeutics, EarlyView.In a cohort of IBS‐D patients recruited to the TRITON study, faecal metabolomic profiling reveals a SCFA‐enriched metabotype associated with increased pain and urgency, altered stool characteristics and accelerated intestinal transit. ABSTRACT Background Metabolomic analysis in irritable bowel syndrome (IBS) has identified metabotypes enriched in ...
T. E. Conley +8 more
wiley +1 more source
Emerging Infectious Diseases, 2011 We used viral metagenomics to identify a novel parvovirus in tissues of a gray fox (Urocyon cinereoargenteus). Nearly full genome characterization and phylogenetic analyses showed this parvovirus (provisionally named gray fox amdovirus) to be distantly ...
Linlin Li +6 more
doaj +1 more source