Results 21 to 30 of about 30,844 (295)
A Previously Undescribed Highly Prevalent Phage Identified in a Danish Enteric Virome Catalog
mSystems, 2021 Through generation of the DEVoC, we added numerous previously uncharacterized viral genomes and genes to the ever-increasing worldwide pool of human gut viromes.
Lore Van Espen +21 more
doaj +3 more sources
Genome binning of viral entities from bulk metagenomics data
Nature Communications, 2022 Here, Johansen et al. develop an approach, Phages from Metagenomics Binning (PHAMB), that allows the binning of thousands of viral genomes directly from bulk metagenomics data, while simultaneously enabling clustering of viral genomes into accurate ...
Joachim Johansen +10 more
doaj +1 more source
Viral Metagenomics on Cerebrospinal Fluid. [PDF]
Genes (Basel), 2019 Identifying the causative pathogen in central nervous system (CNS) infections is crucial for patient management and prognosis. Many viruses can cause CNS infections, yet screening for each individually is costly and time-consuming. Most metagenomic assays can theoretically detect all pathogens, but often fail to detect viruses because of their small ...
Edridge AWD +8 more
europepmc +5 more sources
Microbiome, 2019 Background Mosquitoes are the most important invertebrate viral vectors in humans and harbor a high diversity of understudied viruses, which has been shown in many mosquito virome studies in recent years.
Chenyan Shi +7 more
doaj +1 more source
Rapid screening and identification of viral pathogens in metagenomic data
BMC Medical Genomics, 2021 Background Virus screening and viral genome reconstruction are urgent and crucial for the rapid identification of viral pathogens, i.e., tracing the source and understanding the pathogenesis when a viral outbreak occurs.
Shiyang Song +6 more
doaj +1 more source
Reviews in Medical Virology, 2007 AbstractCharacterisation of new viruses is often hindered by difficulties in amplifying them in cell culture, limited antigenic/serological cross‐reactivity or the lack of nucleic acid hybridisation to known viral sequences. Numerous molecular methods have been used to genetically characterise new viruses without prior in vitro replication or the use ...
openaire +2 more sources
mSphere, 2019 Diarrhea remains one of the most common causes of deaths in children. A limited number of studies have investigated the prevalence of enteric pathogens in Cameroon, and as in many other African countries, the cause of many diarrheal episodes remains ...
Claude Kwe Yinda +9 more
doaj +1 more source
Viruses in Horses with Neurologic and Respiratory Diseases. [PDF]
, 2019 Metagenomics was used to identify viral sequences in the plasma and CSF (cerobrospinal fluid) of 13 horses with unexplained neurological signs and in the plasma and respiratory swabs of 14 horses with unexplained respiratory signs. Equine hepacivirus and
Altan, Eda +7 more
core +1 more source
The bioinformatics of viral metagenomics
EMBnet.journal, 2013 Metagenomic methods provide the veterinary and public health sciences with the promise of new and improved diagnostic tools with unprecedented ability to detect a plethora of known and unknown viromes in clinical samples. Successful metagenomics is based on three main activities where each one must be consistent and reliable for the method to be useful,
Martin Norling +2 more
openalex +3 more sources
Comparing Viral Metagenomic Extraction Methods [PDF]
Current Issues in Molecular Biology, 2017 A crucial step in the molecular detection of viruses in clinical specimens is the efficient extraction of viral nucleic acids. The total yield of viral nucleic acid from a clinical specimen is dependent on the specimen's volume, the initial virus concentration and the effectiveness provided by the extraction method.
Klenner, Jeanette +3 more
openaire +2 more sources