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Correction: Mbigha Donfack et al. Aedes Mosquito Virome in Southwestern Cameroon: Lack of Core Virome, But a Very Rich and Diverse Virome in Ae. africanus Compared to Other Aedes Species. Viruses 2024, 16, 1172

Viruses
In the original publication [...]
Karelle Celes Mbigha Donfack, Lander De Coninck, Stephen Mbigha Ghogomu, Jelle Matthijnssens   +3 more
doaj   +1 more source

Genomic Characteristics of Feline Anelloviruses Isolated from Domestic Cats in Shanghai, China

Veterinary Sciences, 2023
Viral metagenomics techniques allow the high-throughput discovery of possible pathogens carried by companion animals from their feces and other excreta.
Jun Gao, Chengqian Liu, Jianzhong Yi, Ying Shi, Hong Li, Huili Liu   +5 more
doaj   +1 more source

Cell‐Free DNA‐Based Theranostics for Inflammatory Disorders

Advanced Science, EarlyView.
Summary on the dual potential of cfDNA as biomarkers and therapeutic targets for inflammatory disorders. Figure was created with BioRender.com. ABSTRACT Inflammatory disorders are characterized by immune‐mediated inflammatory cascades that can affect multiple organs.
Jiatong Li, Yumei Wang, Xiaoxi Fan, Miao Xu, Jiawen Li, Wenfei Tan, Jianxiang Zhang, Heran Li   +7 more
wiley   +1 more source

From metagenomics to the metagenome: Conceptual change and the rhetoric of translational genomic research [PDF]

, 2009
As the international genomic research community moves from the tool-making efforts of the Human Genome Project into biomedical applications of those tools, new metaphors are being suggested as useful to understanding how our genes work – and for ...
Huss, John Edward, Juengst, Eric Thomas
core   +1 more source

Aedes Mosquito Virome in Southwestern Cameroon: Lack of Core Virome, But a Very Rich and Diverse Virome in Ae. africanus Compared to Other Aedes Species

Viruses
In Cameroon, Aedes mosquitoes transmit various arboviruses, posing significant health risks. We aimed to characterize the Aedes virome in southwestern Cameroon and identify potential core viruses which might be associated with vector competence.
Karelle Celes Mbigha Donfack, Lander De Coninck, Stephen Mbigha Ghogomu, Jelle Matthijnssens   +3 more
doaj   +1 more source

Virseqimprover: an integrated pipeline for viral contig error correction, extension, and annotation [PDF]

PeerJ
Despite the recent surge of viral metagenomic studies, it remains a significant challenge to recover complete virus genomes from metagenomic data. The majority of viral contigs generated from de novo assembly programs are highly fragmented, presenting ...
Haoqiu Song, Saima Sultana Tithi, Connor Brown, Frank O. Aylward, Roderick Jensen, Liqing Zhang   +5 more
doaj   +2 more sources

Metagenomic approaches to assess bacteriophages in various environmental niches [PDF]

, 2017
Bacteriophages are ubiquitous and numerous parasites of bacteria and play a critical evolutionary role in virtually every ecosystem, yet our understanding of the extent of the diversity and role of phages remains inadequate for many ecological niches ...
Hayes, Stephen, Mahony, Jennifer, Nauta, Arjen, van Sinderen, Douwe   +3 more
core   +1 more source

Intratumoral Fusobacterium nucleatum Drives Cancer‐Associated Fibroblasts Enrichment and Immune Exclusion in Esophageal Squamous Cell Carcinoma

Annals of Gastroenterological Surgery, EarlyView.
Fusobacterium nucleatum contributes to the progression of ESCC by inducing NF‐κB–mediated inflammatory signaling in tumor cells and promoting CAFs activation. Its presence may facilitate immune exclusion and tumor invasion through stromal remodeling. Furthermore, F.
Takashi Ofuchi, Qingjiang Hu, Kazuki Omachi, Kosuke Kanemitsu, Hajime Otsu, Yusuke Yonemura, Taro Tobo, Yoshifumi Baba, Masaaki Iwatsuki, Koshi Mimori   +9 more
wiley   +1 more source

Viral Metagenomics: MetaView Software [PDF]

, 2007
The purpose of this report is to design and develop a tool for analysis of raw sequence read data from viral metagenomics experiments. The tool should compare read sequences of known viral nucleic acid sequence data and enable a user to attempt to determine, with some degree of confidence, what virus groups may be present in the sample.
Zhou, Carol, Smith, Jason
openaire   +2 more sources

Metagenomics Study of the Commercial Tomato Virome Focused on Virus Species of Epidemiological Interest

Viruses
Plant viruses have detrimental effects on commercial tomato cultivation leading to severe economic consequences. Viral metagenomics studies provide the opportunity to examine in depth the virome composition of a sample set without any pre-existing ...
Zafeiro Zisi, Isabel Ruiz Movilla, Nikolas Basler, Lila Close, Lucas Ghijselings, Robby Van der Hoeven, Maria Ioanna Papadaki, Ester Rabbinowitsch, Fiona Van Reeth, Jill Swinnen, Elise Vogel, Christine Vos, Inge Hanssen, Jelle Matthijnssens   +13 more
doaj   +1 more source