Results 41 to 50 of about 97,288 (294)

A reappraisal of the phylogenetic placement of the Aquilegia whole-genome duplication [PDF]

Genome Biology, 2020
AbstractThe accurate placement of an ancient whole-genome duplication (WGD) in relation to the lineage divergence is important. Here, we re-investigated the Aquilegia coerulea WGD and found it is more likely lineage-specific rather than shared by all eudicots.
Tao Shi, Jinming Chen
openaire   +3 more sources

Diversification of Non-TIR Class NB-LRR Genes in Relation to Whole-Genome Duplication Events in Arabidopsis

Molecular Plant-Microbe Interactions, 2005
Arabidopsis thaliana is believed to have experienced at least two and possibly three whole-genome duplication events in its evolutionary history. In order to investigate the evolutionary relationships between these duplication events and diversification ...
Kan Nobuta, Tom Ashfield, Sun Kim, Roger W. Innes   +3 more
doaj   +1 more source

Genome-Wide Analysis of MIKC^C-Type MADS-Box Genes Reveals Their Involvement in Flower Development in Malus Lineage

Horticulturae, 2023
MIKCC-type MADS-box genes are involved in floral organ identity determination but remain less studied in the Malus lineage. Based on the conserved domains of this gene family, we identified 341 genes among 13 species.
Kun Ning, Wangxiang Zhang, Donglin Zhang, Yousry A. El-Kassaby, Ting Zhou   +4 more
doaj   +1 more source

Homozygous duplication identified by whole genome sequencing causes LRBA deficiency

npj Genomic Medicine, 2021
In more than one-third of primary immunodeficiency (PID) patients, extensive genetic analysis including whole-exome sequencing (WES) fails to identify the genetic defect.
Daniele Merico, Yehonatan Pasternak, Mehdi Zarrei, Edward J. Higginbotham, Bhooma Thiruvahindrapuram, Ori Scott, Jessica Willett-Pachul, Eyal Grunebaum, Julia Upton, Adelle Atkinson, Vy H. D. Kim, Elbay Aliyev, Khalid Fakhro, Stephen W. Scherer, Chaim M. Roifman   +14 more
doaj   +1 more source

Evolution After Whole-Genome Duplication: A Network Perspective [PDF]

G3 Genes|Genomes|Genetics, 2013
AbstractGene duplication plays an important role in the evolution of genomes and interactomes. Elucidating how evolution after gene duplication interplays at the sequence and network level is of great interest. In this work, we analyze a data set of gene pairs that arose through whole-genome duplication (WGD) in yeast.
Zhu, Yun, Lin, Zhenguo, Nakhleh, Luay
openaire   +3 more sources

microRNAs as Indicators into the Causes and Consequences of Whole Genome Duplication Events [PDF]

Molecular Biology and Evolution, 2021
Whole genome duplications (WGDs) have long been considered the causal mechanism underlying the dramatic increase in vertebrate morphological complexity relative to invertebrates. This is due to the retention and neo-functionalization of paralogues generated during these events, evolving new regulatory circuits, and ultimately morphological novelty ...
Kevin J Peterson, Alan Beavan, Peter J Chabot, Mark A McPeek, Davide Pisani, Bastian Fromm, Oleg Simakov   +6 more
openaire   +4 more sources

Genome-Wide Identification and Evolutionary Analysis of AOMT Gene Family in Pomegranate (Punica granatum)

Agronomy, 2021
Gene duplication is the major resource with which to generate new genes, which provide raw material for novel functions evolution. Thus, to elucidate the gene family evolution after duplication events is of vital importance.
Xinhui Zhang, Weicheng Yuan, Yujie Zhao, Yuan Ren, Xueqing Zhao, Zhaohe Yuan   +5 more
doaj   +1 more source

Sturgeon-Paddlefish Whole Genome Duplication Data

, 2023
Contains Code and Raw Data for Redmond et al 2023, Independent rediploidization masks shared whole genome duplication in the sturgeon-paddlefish ...
Manu Kumar Gundappa (15377978), Daniel J Macqueen (15377980), Aoife McLysaght (118491), Anthony Redmond (9192722), Dearbhaile Casey (10665882)   +4 more
core   +1 more source

Pervasive genome duplications across the plant tree of life and their links to major evolutionary innovations and transitions

Computational and Structural Biotechnology Journal, 2022
Whole-genome duplication (WGD) has occurred repeatedly during plant evolution and diversification, providing genetic layers for evolving new functions and phenotypes.
Xin Qiao, Shaoling Zhang, Andrew H. Paterson   +2 more
doaj   +1 more source

Functional divergence of gene duplicates – a domain-centric view

BMC Evolutionary Biology, 2012
Background Gene duplicates have been shown to evolve at different rates. Here we further investigate the mechanism and functional underpinning of this phenomenon by assessing asymmetric evolution specifically within functional domains of gene duplicates.
Khaladkar Mugdha, Hannenhalli Sridhar
doaj   +1 more source