Results 31 to 40 of about 2,879,199 (294)
Beyond the Whole-Genome Duplication: Phylogenetic Evidence for an Ancient Interspecies Hybridization in the Baker's Yeast Lineage. [PDF]
PLoS Biology, 2015 Whole-genome duplications have shaped the genomes of several vertebrate, plant, and fungal lineages. Earlier studies have focused on establishing when these events occurred and on elucidating their functional and evolutionary consequences, but we still ...
Marina Marcet-Houben, Toni Gabaldón
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BMC Bioinformatics, 2019 Background With the availability of well-assembled genomes of a growing number of organisms, identifying the bioinformatic basis of whole genome duplication (WGD) is a growing field of genomics.
Yongzhi Yang +4 more
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A reappraisal of the phylogenetic placement of the Aquilegia whole-genome duplication [PDF]
Genome Biology, 2020 AbstractThe accurate placement of an ancient whole-genome duplication (WGD) in relation to the lineage divergence is important. Here, we re-investigated the Aquilegia coerulea WGD and found it is more likely lineage-specific rather than shared by all eudicots.
Tao Shi, Jinming Chen
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Whole genome duplications and the diversification of the Globin-X genes of vertebrates [PDF]
Genome Biology and Evolution, 2021 Abstract The globin superfamily of vertebrate genes is a textbook example of how the interplay between local gene duplications, whole-genome duplications, and regulatory changes can facilitate the evolution of novel protein functions.
Federico G. Hoffmann +4 more
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Whole Genome Duplications and Contracted Breakpoint Graphs
SIAM Journal on Computing, 2007 The genome halving problem, motivated by the whole genome duplication events in molecular evolution, was solved by El-Mabrouk and Sankoff in the pioneering paper [SIAM J. Comput., 32 (2003), pp. 754-792]. The El-Mabrouk-Sankoff algorithm is rather complex, inspiring a quest for a simpler solution.
Max A. Alekseyev, Pavel A. Pevzner
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Molecular Plant-Microbe Interactions, 2005 Arabidopsis thaliana is believed to have experienced at least two and possibly three whole-genome duplication events in its evolutionary history. In order to investigate the evolutionary relationships between these duplication events and diversification ...
Kan Nobuta +3 more
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Subfunctionalization versus neofunctionalization after whole-genome duplication [PDF]
Nature Genetics, 2017 The question of what is the predominant evolutionary fate of genes after duplication events has been hotly debated for decades 1,2 . Two recently published articles in Nature (Lien et al . 3 ) and Nature Genetics (Braasch
Sandve, Simen R. +2 more
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Horticulturae, 2023 MIKCC-type MADS-box genes are involved in floral organ identity determination but remain less studied in the Malus lineage. Based on the conserved domains of this gene family, we identified 341 genes among 13 species.
Kun Ning +4 more
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The shape of human gene family phylogenies [PDF]
, 2006 Background: The shape of phylogenetic trees has been used to make inferences about the evolutionary process by comparing the shapes of actual phylogenies with those expected under simple models of the speciation process. Previous studies have focused
James A Cotton +5 more
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Deterministic whole-genome amplification of single cells
, 2022 S.69-86This chapter describes a single-cell whole genome amplification method (WGA) that has been originally published under the name "Single Cell Comparative Genomic Hybridization (SCOMP)" (Klein et al., Proc Natl Acad Sci U S A 96(8):4494-4499, 1999 ...
Czyz, Zbigniew Tadeusz +1 more
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