A systematic review of the microbiome of <i>Hyalomma</i> Koch, 1844 ticks using next-generation sequencing of the <i>16S ribosomal RNA</i> gene. [PDF]
Vet WorldMasri MTA, Al-Deeb MA.
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Aminoglycoside Resistance: Updates with a Focus on Acquired 16S Ribosomal RNA Methyltransferases. [PDF]
Infect Dis Clin North Am, 2020 Wachino JI, Doi Y, Arakawa Y.
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Successful identification of Granulicatella adiacens in postoperative acute infectious endophthalmitis using a bacterial 16S ribosomal RNA gene-sequencing platform with MinION™: A case report. [PDF]
Am J Ophthalmol Case Rep, 2022 Ishino M +7 more
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The 3′-Terminal Sequence of Escherichia coli 16S Ribosomal RNA: Complementarity to Nonsense Triplets and Ribosome Binding Sites [PDF]
Proceedings of the National Academy of Sciences of the United States of America, 1974 John Shine, L. Dalgarno
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Updating the 97% identity threshold for 16S ribosomal RNA OTUs [PDF]
bioRxiv, 2017 R. C. Edgar
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SEARCH_16S: A new algorithm for identifying 16S ribosomal RNA genes in contigs and chromosomes [PDF]
bioRxiv, 2017 R. C. Edgar
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Computer modeling 16 S ribosomal RNA [PDF]
Journal of Molecular Biology, 1991 A three-dimensional structure for 16 S RNA has been produced with a computer protocol that is not dependent on human intervention. This protocol improves upon traditional modeling techniques by using distance geometry to fold the molecule in an objective and reproducible fashion.
J M, Hubbard, J E, Hearst
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Systematic identification of gene families for use as markers for phylogenetic and phylogeny- driven ecological studies of bacteria and archaea and their major subgroups [PDF]
, 2013 With the astonishing rate that the genomic and metagenomic sequence data sets are accumulating, there are many reasons to constrain the data analyses.
Eisen, Jonathan A. +2 more
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Frontiers in Microbiology, 2022 Ribosome assembly is a complex fundamental cellular process that involves assembling multiple ribosomal proteins and several ribosomal RNA species in a highly coordinated yet flexible and resilient manner.
Vignesh M. P. Babu +3 more
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A comparison of structural and evolutionary attributes of Escherichia coli and Thermus thermophilus small ribosomal subunits: signatures of thermal adaptation. [PDF]
PLoS ONE, 2013 Here we compare the structural and evolutionary attributes of Thermus thermophilus and Escherichia coli small ribosomal subunits (SSU). Our results indicate that with few exceptions, thermophilic 16S ribosomal RNA (16S rRNA) is densely packed compared to
Saurav Mallik, Sudip Kundu
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