Results 21 to 30 of about 128,331 (155)

Taxonomic and Characterization Methods of Streptomyces: A Review

open access: yesProgress in Microbes and Molecular Biology, 2018
The 16S ribosomal RNA gene is the gold standard for taxonomic identification and phylogenetic study of most of the bacteria. However, the resolution of 16S rRNA gene is found to be insufficient to distinguish closely related Streptomyces species within ...
Jodi Woan-Fei Law   +4 more
doaj   +1 more source

Metaxa : a software tool for automated detection and discrimination among ribosomal small subunit (12S/16S/18S) sequences of archaea, bacteria, eukaryotes, mitochondria, and chloroplasts in metagenomes and environmental sequencing datasets [PDF]

open access: yes, 2011
Peer ...
Abarenkov, Kessy   +9 more
core   +1 more source

TaxCollector: Modifying Current 16S rRNA Databases for the Rapid Classification at Six Taxonomic Levels

open access: yesDiversity, 2010
The high level of conservation of 16S ribosomal RNA gene (16S rRNA) in all Prokaryotes makes this gene an ideal tool for the rapid identification and classification of these microorganisms. Databases such as the Ribosomal Database Project II (RDP-II) and
Eric W. Triplett   +3 more
doaj   +1 more source

Measurement of the rates of synthesis of three components of ribosomes of Mycobacterium fortuitum: a theoretical approach to qRT-PCR experimentation. [PDF]

open access: yesPLoS ONE, 2010
BACKGROUND: Except for the ribosomal protein L12 (rplL), ribosomal proteins are present as one copy per ribosome; L12 (rplL) is unusual because it is present as four copies per ribosome.
Maria Jesus Garcia   +2 more
doaj   +1 more source

Yeast Rrp8p, a novel methyltransferase responsible for m1A 645 base modification of 25S rRNA [PDF]

open access: yes, 2012
Ribosomal RNA undergoes various modifications to optimize ribosomal structure and expand the topological potential of RNA. The most common nucleotide modifications in ribosomal RNA (rRNA) are pseudouridylations and 2'-O methylations (Nm), performed by H ...
Entian, Karl-Dieter   +5 more
core   +1 more source

Identification and Phylogenetic Analysis of Bacterial Isolates from Litopenaeus vannamei Shrimp Culture System and Gut Environment Based on 16SrRNA Gene Sequence Data

open access: yesMicrobiology Indonesia, 2010
Selected bacterial isolates from a Litopenaeus vannamei shrimp culture system and gut environment were assessed using 16S rRNA gene sequencing method to identify their identity and to construct their phylogenetic relationship.
TUBAGUS HAERU RAHAYU   +4 more
doaj   +1 more source

Molecular and Morphological identification of the genus Dineutus MacLeay, 1825 (Coleoptera, Gyrinidae) from Eastern Ghats, India [PDF]

open access: yesJournal of Insect Biodiversity and Systematics, 2023
The present study is on the morphology and molecular data of the genus Dineutus MacLeay, were collected from the Eastern Ghats mountains in Odisha, Andhra Pradesh, Telangana, Tamil Nadu states located in the eastern Ghats of India.
Jaiswal Deepa   +5 more
doaj  

The active microbial community more accurately reflects the anaerobic digestion process: 16S rRNA (gene) sequencing as a predictive tool [PDF]

open access: yes, 2018
Background: Amplicon sequencing methods targeting the 16S rRNA gene have been used extensively to investigate microbial community composition and dynamics in anaerobic digestion.
de Vrieze, Jo   +3 more
core   +2 more sources

Crinoid phylogeny: a preliminary analysis (Echinodermata: Crinoidea) [PDF]

open access: yes, 2004
We describe the first molecular and morphological analysis of extant crinoid high-level inter-relationships. Nuclear and mitochondrial gene sequences and a cladistically coded matrix of 30 morphological characters are presented, and analysed by ...
Ameziane, N.   +3 more
core   +3 more sources

Diagnostic Techniques for Early Detection of Phytoplasma Diseases

open access: yesSyrian Journal for Science and Innovation, 2023
Phytoplasmas are a type of bacteria, specifically belonging to the group of Mollicutes, characterized by their lack of cell walls and inability to be cultured in lab settings.
Naofel Aljafer, Hail Rihan
doaj   +1 more source

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