Progress in the 16S rRNA Gene Sequencing in Forensic Science [PDF]
Fayixue Zazhi, 2018 Forensic microorganism is one of the hotspots of forensic science research. Due to its conservatism and specificity, the 16S rRNA gene is found to be an ideal marker for forensic identification.
SONG Guo-qing, CAO Yu, LI Hui，et al.
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Application of 16S rRNA gene sequencing in Helicobacter pylori detection [PDF]
PeerJ, 2020 Helicobacter pylori is one of the major stomach microbiome components, promoting development of inflammation and gastric cancer in humans. H. pylori has a unique ability to transform into a coccoidal form which is difficult to detect by many diagnostic ...
Aleksander Szymczak +6 more
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Phylogenetic inference of Coxiella burnetii by 16S rRNA gene sequencing. [PDF]
PLoS ONE, 2017 Coxiella burnetii is a human pathogen that causes the serious zoonotic disease Q fever. It is ubiquitous in the environment and due to its wide host range, long-range dispersal potential and classification as a bioterrorism agent, this microorganism is ...
Heather P McLaughlin +10 more
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metaSPARSim: a 16S rRNA gene sequencing count data simulator [PDF]
BMC Bioinformatics, 2019 Background In the last few years, 16S rRNA gene sequencing (16S rDNA-seq) has seen a surprisingly rapid increase in election rate as a methodology to perform microbial community studies.
Ilaria Patuzzi +4 more
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Species identification and profiling of complex microbial communities using shotgun Illumina sequencing of 16S rRNA amplicon sequences. [PDF]
PLoS ONE, 2013 The high throughput and cost-effectiveness afforded by short-read sequencing technologies, in principle, enable researchers to perform 16S rRNA profiling of complex microbial communities at unprecedented depth and resolution. Existing Illumina sequencing
Swee Hoe Ong +7 more
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Comparison of 16S rRNA gene sequences of genus Methanobrevibacter [PDF]
BMC Microbiology, 2004 The phylogeny of the genus Methanobrevibacter was established almost 25 years ago on the basis of the similarities of the 16S rRNA oligonucleotide catalogs. Since then, many 16S rRNA gene sequences of newly isolated strains or clones representing the genus Methanobrevibacter have been deposited.
Patole Milind S +6 more
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Sequence Diversity of Neisseria meningitidis 16S rRNA Genes and Use of 16S rRNA Gene Sequencing as a Molecular Subtyping Tool [PDF]
Journal of Clinical Microbiology, 2002 ABSTRACT We investigated the diversity of the primary sequences of 16S rRNA genes among Neisseria meningitidis strains (Men) and evaluated the use of this approach as a molecular subtyping tool. We aligned and compared a 1,417-bp fragment of the 16S rRNA gene from 264 Men strains of serogroups A, B, C, and
Claudio T, Sacchi +4 more
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Congruence between strain morphology and the 16S rRNA gene sequence [PDF]
Microbiology, 2004 n ...
Linda, Cavaletti, Paolo, Monciardini
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BMC Microbiology, 2021 Background Species-level genetic characterization of complex bacterial communities has important clinical applications in both diagnosis and treatment. Amplicon sequencing of the 16S ribosomal RNA (rRNA) gene has proven to be a powerful strategy for the ...
Yoshiyuki Matsuo +13 more
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Virtual metagenome reconstruction from 16S rRNA gene sequences [PDF]
Nature Communications, 2012 Microbial ecologists have investigated roles of species richness and diversity in a wide variety of ecosystems. Recently, metagenomics have been developed to measure functions in ecosystems, but this approach is cost-intensive. Here we describe a novel method for the rapid and efficient reconstruction of a virtual metagenome in environmental microbial ...
Shujiro, Okuda +4 more
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