Results 121 to 130 of about 3,982 (151)

RNA modifications: molecular orchestrators of wound healing. [PDF]

Burns Trauma
Guo X, Liu L, Yang J, Dai Y, Zhang Q, Gu R, Tan M, Tang M, Nie X.   +8 more
europepmc   +1 more source

Biological interpretation of DNA/RNA modification by ALKBH proteins and their role in human cancer. [PDF]

Eur J Med Res
Yang S, Xing J, Song Y, Cui J, Bao L, Xi Q, Zuo Y.   +6 more
europepmc   +1 more source

MapID-based quantitative mapping of chemical modifications and expression of human transfer RNA. [PDF]

Cell Chem Biol
Tepe ML, Chen Y, Carso A, Zhou H.
europepmc   +1 more source

The plastisphere: not a unique biofilm but a unifying concept for the interdisciplinary plastic biofilm research community. [PDF]

FEMS Microbiol Ecol
Carrillo-Barragán P, Ballesté E, Sauer M, Christie-Oleza J.   +3 more
europepmc   +1 more source

Engineering Membrane-Bound Alkane Monooxygenase from Marinobacter sp. for Increased Activity in the Selective ω-Hydroxylation of Linear and Branched Aliphatic Esters

Spasic J, Nigl A, Cheon H, Kaiserer CL, Galušić S, van der Pol E, Malihan-Yap L, Park J, Kourist R.   +8 more
europepmc   +1 more source

Generalization of Classification of AlkB Family Alkane Monooxygenases from <i>Rhodococcus</i> (<i>sensu lato</i>) Group Based on Phylogenetic Analysis and Genomic Context Comparison. [PDF]

Int J Mol Sci
Petrikov KV, Vetrova AA, Ivanova AA, Sazonova OI, Pozdnyakova-Filatova IY.   +4 more
europepmc   +1 more source

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Theory Uncovers an Unusual Mechanism of DNA Repair of a Lesioned Adenine by AlkB Enzymes

Journal of the American Chemical Society, 2014
DNA-base lesions cause cancer and propagate into the genome. We use in-protein QM/MM calculations to study the repair of etheno-bridged adenine (εA) by the iron(IV)-oxo species of AlkB enzymes. Recent experimental investigations, using mass-spectrometry and in crystallo isolation, suggested that εA was repaired by formation of an epoxide (εA-ep) that ...
Usharani Dandamudi, Sason Shaik, Binju Wang   +2 more
exaly   +3 more sources

Replacement of non-heme Fe(II) with Cu(II) in the α-ketoglutarate dependent DNA repair enzyme AlkB: Spectroscopic characterization of the active site

Journal of Inorganic Biochemistry, 2007
The bacterial DNA repair enzyme AlkB is an alpha-ketoglutarate (alphaKG) dependent non-heme Fe(II) containing dioxygenase. Here we describe, for the first time, the preparation of a Cu(II)-reconstituted form of AlkB in various complexes. Spectroscopic characterization showed correct AlkB folding upon incorporation of Cu(II) in the active site.
Boris Bleijlevens, Steve Matthews, Barbara Sedǵwick   +2 more
exaly   +3 more sources

Protocols for Purifying and Characterizing Integral Membrane AlkB Enzymes

Springer Protocols, 2015
Rachel Narehood Austin
exaly   +2 more sources

Aberrant activity of the DNA repair enzyme AlkB

Journal of Inorganic Biochemistry, 2004
Escherichia coli AlkB is a DNA/RNA repair enzyme containing a mononuclear Fe(II) site that couples the oxidative decomposition of alpha-ketoglutarate (alphaKG) to the hydroxylation of 1-methyladenine or 3-methylcytosine lesions in DNA or RNA, resulting in release of formaldehyde and restoration of the normal bases.
Timothy F, Henshaw, Michael, Feig, Robert P, Hausinger   +2 more
openaire   +2 more sources