Results 1 to 10 of about 1,090,749 (217)
aaHash: recursive amino acid sequence hashing. [PDF]
Bioinform Adv, 2023 AbstractMotivationK-mer hashing is a common operation in many foundational bioinformatics problems. However, generic string hashing algorithms are not optimized for this application. Strings in bioinformatics use specific alphabets, a trait leveraged for nucleic acid sequences in earlier work.
Wong J +4 more
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Organizing the bacterial annotation space with amino acid sequence embeddings [PDF]
BMC Bioinformatics, 2022 Background Due to the ever-expanding gap between the number of proteins being discovered and their functional characterization, protein function inference remains a fundamental challenge in computational biology.
Susanna R. Grigson +3 more
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Protein Solubility Prediction Based on Sequence Feature Fusion [PDF]
Jisuanji kexue, 2022 Protein solubility plays an important role in the research of drug design.Traditional biological experiments of detecting protein solubility are time-consuming and laborious.Identifying protein solubility based on computational methods has become an ...
NIU Fu-sheng, GUO Yan-bu, LI Wei-hua, LIU Wen-yang
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Identification and in silico structural and functional analysis of a trypsin-like protease from shrimp Macrobrachium carcinus [PDF]
PeerJ, 2020 Macrobrachium carcinus (Linnaeus, 1758) is a species of freshwater shrimp widely distributed from Florida southwards to southern Brazil, including southeast of Mexico.
José M. Viader-Salvadó +5 more
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Amino acid sequence of rabbit apolipoprotein E.
Journal of Lipid Research, 1991 The complete amino acid sequence of rabbit apolipoprotein E (apoE) was determined by generating three sets of peptides using cyanogen bromide, endoproteinase AspN, and Staphylococcus aureus V8 protease to cleave the protein.
BR Lee +6 more
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Amino acid sequence alignment of vertebrate CAPN3/calpain-3/p94
Data in Brief, 2015 CAPN3 is a calpain superfamily member that is predominantly expressed in skeletal muscle. So far, clear CAPN3 orthologs were found only in vertebrates.
Yasuko Ono, Hiroyuki Sorimachi
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Foods, 2021 Although the bioactivities of bovine lactoferrin have been extensively investigated, little is known about deer milk lactoferrin bioactivity and its amino acid sequence.
Ye Wang +4 more
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Isolation and characterization of cDNA clones corresponding to two different human apoC-III alleles.
Journal of Lipid Research, 1985 We have recently reported that the human apolipoprotein A-I (apoA-I) and apolipoprotein C-III (apoC-III) genes are physically linked and that the presence of a DNA insertion in the apoA-I gene is correlated with apoA-I-apoC-III deficiency in patients ...
S K Karathanasis +2 more
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Predicting the functional effect of amino acid substitutions and indels. [PDF]
PLoS ONE, 2012 As next-generation sequencing projects generate massive genome-wide sequence variation data, bioinformatics tools are being developed to provide computational predictions on the functional effects of sequence variations and narrow down the search of ...
Yongwook Choi +4 more
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Can Power Laws Help Us Understand Gene and Proteome Information?
Advances in Mathematical Physics, 2013 Proteins are biochemical entities consisting of one or more blocks typically folded in a 3D pattern. Each block (a polypeptide) is a single linear sequence of amino acids that are biochemically bonded together.
J. A. Tenreiro Machado +2 more
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