Results 1 to 10 of about 1,014,487 (147)

Organizing the bacterial annotation space with amino acid sequence embeddings. [PDF]

open access: yesBMC Bioinformatics, 2022
Background Due to the ever-expanding gap between the number of proteins being discovered and their functional characterization, protein function inference remains a fundamental challenge in computational biology.
Grigson SR   +3 more
europepmc   +2 more sources

Protein Solubility Prediction Based on Sequence Feature Fusion [PDF]

open access: yesJisuanji kexue, 2022
Protein solubility plays an important role in the research of drug design.Traditional biological experiments of detecting protein solubility are time-consuming and laborious.Identifying protein solubility based on computational methods has become an ...
NIU Fu-sheng, GUO Yan-bu, LI Wei-hua, LIU Wen-yang
doaj   +1 more source

Identification and in silico structural and functional analysis of a trypsin-like protease from shrimp Macrobrachium carcinus [PDF]

open access: yesPeerJ, 2020
Macrobrachium carcinus (Linnaeus, 1758) is a species of freshwater shrimp widely distributed from Florida southwards to southern Brazil, including southeast of Mexico.
José M. Viader-Salvadó   +5 more
doaj   +2 more sources

Amino acid sequence of rabbit apolipoprotein E.

open access: yesJournal of Lipid Research, 1991
The complete amino acid sequence of rabbit apolipoprotein E (apoE) was determined by generating three sets of peptides using cyanogen bromide, endoproteinase AspN, and Staphylococcus aureus V8 protease to cleave the protein.
BR Lee   +6 more
doaj   +1 more source

Amino acid sequence alignment of vertebrate CAPN3/calpain-3/p94

open access: yesData in Brief, 2015
CAPN3 is a calpain superfamily member that is predominantly expressed in skeletal muscle. So far, clear CAPN3 orthologs were found only in vertebrates.
Yasuko Ono, Hiroyuki Sorimachi
doaj   +1 more source

Isolation and characterization of cDNA clones corresponding to two different human apoC-III alleles.

open access: yesJournal of Lipid Research, 1985
We have recently reported that the human apolipoprotein A-I (apoA-I) and apolipoprotein C-III (apoC-III) genes are physically linked and that the presence of a DNA insertion in the apoA-I gene is correlated with apoA-I-apoC-III deficiency in patients ...
S K Karathanasis   +2 more
doaj   +1 more source

Predicting the functional effect of amino acid substitutions and indels. [PDF]

open access: yesPLoS ONE, 2012
As next-generation sequencing projects generate massive genome-wide sequence variation data, bioinformatics tools are being developed to provide computational predictions on the functional effects of sequence variations and narrow down the search of ...
Yongwook Choi   +4 more
doaj   +1 more source

Amino Acid Sequences of Lactoferrin from Red Deer (Cervus elaphus) Milk and Antimicrobial Activity of Its Derived Peptides Lactoferricin and Lactoferrampin

open access: yesFoods, 2021
Although the bioactivities of bovine lactoferrin have been extensively investigated, little is known about deer milk lactoferrin bioactivity and its amino acid sequence.
Ye Wang   +4 more
doaj   +1 more source

Can Power Laws Help Us Understand Gene and Proteome Information?

open access: yesAdvances in Mathematical Physics, 2013
Proteins are biochemical entities consisting of one or more blocks typically folded in a 3D pattern. Each block (a polypeptide) is a single linear sequence of amino acids that are biochemically bonded together.
J. A. Tenreiro Machado   +2 more
doaj   +1 more source

STAR: predicting recombination sites from amino acid sequence

open access: yesBMC Bioinformatics, 2006
Background Designing novel proteins with site-directed recombination has enormous prospects. By locating effective recombination sites for swapping sequence parts, the probability that hybrid sequences have the desired properties is increased ...
Thier Ricarda   +3 more
doaj   +1 more source

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