Results 11 to 20 of about 113,363 (75)
Discovery of a Novel Member of the Carlavirus Genus from Soybean (Glycine max L. Merr.)
Pathogens, 2021 A novel member of the Carlavirus genus, provisionally named soybean carlavirus 1 (SCV1), was discovered by RNA-seq analysis of randomly collected soybean leaves in Illinois, USA.
Thanuja Thekke-Veetil +6 more
doaj +1 more source
Distances and classification of amino acids for different protein secondary structures [PDF]
PRE 67,051927 (2003), 2002 Window profiles of amino acids in protein sequences are taken as a description of the amino acid environment. The relative entropy or Kullback-Leibler distance derived from profiles is used as a measure of dissimilarity for comparison of amino acids and secondary structure conformations.
arxiv +1 more source
Three classes of tetrahydrobiopterin-dependent enzymes
Pteridines, 2013 Current knowledge distinguishes three classes of tetrahydrobiopterin-dependent enzymes as based on protein sequence similarity. These three protein sequence clusters hydroxylate three types of substrate atoms and use three different forms of iron for ...
Werner Ernst R.
doaj +1 more source
SERS discrimination of single amino acid residue in single peptide by plasmonic nanocavities [PDF]
Angewandte Chemie International Edition, 59, 11423-11431 (2020), 2019 Surface-enhanced Raman spectroscopy (SERS) is a sensitive label-free optical method that can provide fingerprint Raman spectra of biomolecules such as DNA, amino acids and proteins. While SERS of single DNA molecule has been recently demonstrated, Raman analysis of single protein sequence was not possible because the SERS spectra of proteins are ...
arxiv +1 more source
DPST: De Novo Peptide Sequencing with Amino-Acid-Aware Transformers [PDF]
arXiv, 2022 De novo peptide sequencing aims to recover amino acid sequences of a peptide from tandem mass spectrometry (MS) data. Existing approaches for de novo analysis enumerate MS evidence for all amino acid classes during inference. It leads to over-trimming on receptive fields of MS data and restricts MS evidence associated with following undecoded amino ...
arxiv
Isolation and Identification of a Novel Phlebovirus, Hedi Virus, from Sandflies Collected in China
Viruses, 2021 We report the isolation of a newly recognized phlebovirus, Hedi virus (HEDV), from Phlebotomus chinensis sandflies collected in Shanxi Province, China. The virus’ RNA is comprised of three segments.
Ziqian Xu +7 more
doaj +1 more source
European Journal of Entomology, 2008 Two glutathione S-transferase (GST) cDNAs, GSTD2 and GSTS2, were cloned from the silkworm Bombyx mori. The B. mori GSTD2 (BmGSTD2) gene spans 4371 bp and consists of four introns and five exons that encode 222 amino acid residues.
Zhong Zheng GUI +6 more
doaj +1 more source
Low level sequence variant analysis of recombinant proteins: an optimized approach.
PLoS ONE, 2012 Sequence variants in recombinant biopharmaceuticals may have a relevant and unpredictable impact on clinical safety and efficacy. Hence, their sensitive analysis is important throughout bioprocess development.
Anne Zeck +10 more
doaj +1 more source
Molecular diagnosis and genetic relationship of foot and mouth disease virus serotype Asia1/Basne/Sul/2015 [PDF]
Iraqi Journal of Veterinary Sciences, 2019 Foot and Mouth Disease (FMD) is the most economically important viral-induced livestock disease worldwide. From April to May of 2015, tongue epithelial tissue samples were collected from 36 cattle in six villages, which share the border with Iran ...
Jeza Muhamad Abdul aziz +2 more
doaj +1 more source
Local sequence-structure relationships in proteins [PDF]
arXiv, 2021 We seek to understand the interplay between amino acid sequence and local structure in proteins. Are some amino acids unique in their ability to fit harmoniously into certain local structures? What is the role of sequence in sculpting the putative native state folds from myriad possible conformations?
arxiv