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Computational Methods to Predict Conformational B-Cell Epitopes [PDF]

open access: yesBiomolecules
Accurate computational prediction of B-cell epitopes can greatly enhance biomedical research and rapidly advance efforts to develop therapeutics, monoclonal antibodies, vaccines, and immunodiagnostic reagents.
M. Carroll, E. Rosenbaum, R. Viswanathan
doaj   +7 more sources

An Introduction to B-Cell Epitope Mapping and In Silico Epitope Prediction [PDF]

open access: yesJournal of Immunology Research, 2016
Identification of B-cell epitopes is a fundamental step for development of epitope-based vaccines, therapeutic antibodies, and diagnostic tools. Epitope-based antibodies are currently the most promising class of biopharmaceuticals. In the last decade, in-
Lenka Potocnakova   +2 more
doaj   +4 more sources

Bcipep: A database of B-cell epitopes [PDF]

open access: yesBMC Genomics, 2005
Abstract Background Bcipep is a database of experimentally determined linear B-cell epitopes of varying immunogenicity collected from literature and other publicly available databases. Results The current version of Bcipep database ...
Bhasin Manoj   +2 more
openaire   +5 more sources

Analysis of Virus-Specific B Cell Epitopes Reveals Extensive Antigen Degradation Prior to Recognition [PDF]

open access: yesCells
B cell epitopes must be visible for recognition by cognate B cells and/or antibodies. Here, we studied that premise for known linear B cell epitopes that were collected from the Immune Epitope Database as being recognized by humans during microbial ...
Alvaro Ras-Carmona, Pedro A. Reche
doaj   +2 more sources

Optimizing sheep B-cell epitopes in Echinococcus granulosus recombinant antigen P29 for vaccine development [PDF]

open access: yesFrontiers in Immunology
BackgroundEchinococcus granulosus is a widespread zoonotic parasitic disease, significantly impacting human health and livestock development; however, no vaccine is currently available for humans. Our preliminary studies indicate that recombinant antigen
Jihui Yang   +15 more
doaj   +2 more sources

B–cell epitopes within swine flu virus T–cell epitopes

open access: yesAsian Pacific Journal of Tropical Biomedicine, 2014
Viroj Wiwanitkit
doaj   +3 more sources

BepiTBR: T-B reciprocity enhances B cell epitope prediction

open access: yesiScience, 2022
Summary: The ability to predict B cell epitopes is critical for biomedical research and many clinical applications. Investigators have observed the phenomenon of T-B reciprocity, in which candidate B cell epitopes with nearby CD4+ T cell epitopes have ...
James Zhu   +5 more
doaj   +1 more source

Revelation of Potent Epitopes Present in Unannotated ORF Antigens of SARS-CoV-2 for Epitope-Based Polyvalent Vaccine Design Using Immunoinformatics Approach

open access: yesFrontiers in Immunology, 2021
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) kills thousands of people worldwide every day, thus necessitating rapid development of countermeasures.
Patil Pranita Uttamrao   +3 more
doaj   +1 more source

Improved method for linear B-cell epitope prediction using antigen's primary sequence. [PDF]

open access: yesPLoS ONE, 2013
One of the major challenges in designing a peptide-based vaccine is the identification of antigenic regions in an antigen that can stimulate B-cell's response, also called B-cell epitopes.
Harinder Singh   +2 more
doaj   +1 more source

Prediction of B cell epitopes in proteins using a novel sequence similarity-based method

open access: yesScientific Reports, 2022
Prediction of B cell epitopes that can replace the antigen for antibody production and detection is of great interest for research and the biotech industry. Here, we developed a novel BLAST-based method to predict linear B cell epitopes.
Alvaro Ras-Carmona   +3 more
doaj   +1 more source

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