Results 61 to 70 of about 32,198,489 (390)

Optimal SNP filtering strategies for pedigree reconstruction: A case study with wild red‐spotted masu salmon population

Population Ecology, Volume 67, Issue 2, Page 125-139, April 2025.
In this article, we tested optimal SNP filtering strategies for accurate parentage assignment and pedigree reconstruction for a wild population of red‐spotted masu salmon, Oncorhynchus masou ishikawae. We found that mid‐point filtering in terms of call rate and minor allele frequency performs well for pedigree reconstruction.
Shohei Noda, Tetsuya Akita, Rui Ueda, Takafumi Katsumura, Yasuyuki Hashiguchi, Hirohiko Takeshima, Takuya Sato   +6 more
wiley   +1 more source

Quasi-greedy bases for sequences with gaps

Nonlinear Analysis, 2021
In this paper, we establish new advances in the theory started by T. Oikhberg in [15] where the author joins greedy approximation theory with the use of sequences with gaps. Concretely, we address and partially answer three open questions related to quasi-greedy bases for sequences with gaps posed in [15, Section 6].
M. Berasategui, P.M. Berná
openaire   +4 more sources

Pilot Decontamination Through Pilot Sequence Hopping in Massive MIMO Systems [PDF]

, 2014
This work concerns wireless cellular networks applying massive multiple-input multiple-output (MIMO) technology. In such a system, the base station in a given cell is equipped with a very large number (hundreds or even thousands) of antennas and serves ...
de Carvalho, Elisabeth, Sørensen, Jesper H.   +1 more
core   +2 more sources

Evaluating the origin and spread of spotted lanternfly (Lycorma delicatula) in Japan

Population Ecology, Volume 67, Issue 2, Page 162-179, April 2025.
The invasive spotted lanternfly (Lycorma delicatula) is native to China and is a serious economic pest in the Republic of Korea and the United States, though it is not considered a pest in Japan. We established a distribution map of L. delicatula in Japan through a comprehensive review of published literature and citizen science reports and analyzed ...
Matthew T. Kamiyama, Michihiko Takahashi, Hannah J. Broadley, Francesc Gómez‐Marco, Mark S. Hoddle, Kenji Matsuura   +5 more
wiley   +1 more source

Engineering RsDddA as mitochondrial base editor with wide target compatibility and enhanced activity

Molecular Therapy: Nucleic Acids, 2023
Double-stranded DNA-specific cytidine deaminase (DddA) base editors hold great promise for applications in bio-medical research, medicine, and biotechnology.
Kai Cheng, Cao Li, Jiachuan Jin, Xuezhen Qian, Jiayin Guo, Limini Shen, YiChen Dai, Xue Zhang, Zhanwei Li, Yichun Guan, Fei Zhou, Jin Tang, Jun Zhang, Bin Shen, Xin Lou   +14 more
doaj  

CAP3: A DNA sequence assembly program.

Genome Research, 1999
We describe the third generation of the CAP sequence assembly program. The CAP3 program includes a number of improvements and new features. The program has a capability to clip 5' and 3' low-quality regions of reads.
Xiaoqiu Huang, A. Madan
semanticscholar   +1 more source

Nucleotide sequence of the luxA gene of Vibrio harveyi and the complete amino acid sequence of the alpha subunit of bacterial luciferase [PDF]

, 1985
The nucleotide sequence of the 1.85-kilobase EcoRI fragment from Vibrio harveyi that was cloned using a mixed-sequence synthetic oligonucleotide probe (Cohn, D. H., Ogden, R. C., Abelson, J. N., Baldwin, T. O., Nealson, K. H., Simon, M.
Baldwin, Thomas O., Bonam, Duane, Cohn, Daniel H., Mileham, Alan J., Nealson, Kenneth H., Rausch, Steven K., Simon, Melvin I.   +6 more
core  

Comparison of kinship‐identification methods for robust stock assessment using close‐kin mark–recapture data for Pacific bluefin tuna

Population Ecology, Volume 67, Issue 2, Page 140-152, April 2025.
In this study, we compared three methods for kinship identification using different algorithms in samples of wild Pacific bluefin tuna and generated genotyping data. The three methods resulted in different numbers of inferred kinship pairs for both generated and actual data. Particularly for the half‐sibling pairs, considerable number of false‐positive
Yohei Tsukahara, Reiichiro Nakamichi, Aiko Matsuura, Tetsuya Akita, Atushi Fujiwara, Nobuaki Suzuki   +5 more
wiley   +1 more source

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure.

Journal of Molecular Biology, 1999
An improved dynamic programming algorithm is reported for RNA secondary structure prediction by free energy minimization. Thermodynamic parameters for the stabilities of secondary structure motifs are revised to include expanded sequence dependence as ...
D. Mathews, Jeffrey Sabina, M. Zuker, D. Turner   +3 more
semanticscholar   +1 more source

The dual nature of TDC – bridging dendritic and T cells in immunity

FEBS Letters, EarlyView.
TDC are hematopoietic cells combining dendritic and T cell features. They reach secondary lymphoid organs (SLOs) and peripheral organs (liver and lungs) after FLT3‐dependent development in the bone marrow and maturation in the thymus. TDC are activated and enriched in SLOs upon viral infection, suggesting that they might play unique immune roles, since
Maria Nelli, Mirela Kuka
wiley   +1 more source