Results 21 to 30 of about 8,774,932 (333)

miR-496 inhibits proliferation via LYN and AKT pathway in gastric cancer

open access: yesOpen Medicine, 2021
MicroRNAs (miRNAs) operate as tumor suppressor or carcinogen to regulate cell proliferation, metastasis, invasion, differentiation, apoptosis, and metabolic process.
Su Rui, Zhao Enhong, Zhang Jun
doaj   +1 more source

Computing the protein binding sites [PDF]

open access: yesBMC Bioinformatics, 2011
Identifying the location of binding sites on proteins is of fundamental importance for a wide range of applications including molecular docking, de novo drug design, structure identification and comparison of functional sites. Structural genomic projects are beginning to produce protein structures with unknown functions.
Guo, Fei, Wang, Lusheng
openaire   +2 more sources

Parameter Identification for a Model of Neonatal Fc Receptor-Mediated Recycling of Endogenous Immunoglobulin G in Humans

open access: yesFrontiers in Immunology, 2019
Salvage of endogenous immunoglobulin G (IgG) by the neonatal Fc receptor (FcRn) is implicated in many clinical areas, including therapeutic monoclonal antibody kinetics, patient monitoring in IgG multiple myeloma, and antibody-mediated transplant ...
Felicity Kendrick   +4 more
doaj   +1 more source

P53 Binding Sites in Transposons [PDF]

open access: yesFrontiers in Genetics, 2012
Repeated regions of the genome harbor more functional information than commonly assumed. Two decades ago, a highly influential paper describing the consensus binding site for the key transcription factor p53 was published in Nature Genetics by el-Deiry et al. (1992). Recently, it has been observed that many p53 binding sites are species-specific (Jegga
Zemojtel, T., Vingron, M.
openaire   +4 more sources

Adaptive evolution of transcription factor binding sites [PDF]

open access: yes, 2004
The regulation of a gene depends on the binding of transcription factors to specific sites located in the regulatory region of the gene. The generation of these binding sites and of cooperativity between them are essential building blocks in the ...
Berg, Johannes   +2 more
core   +4 more sources

PrankWeb: a web server for ligand binding site prediction and visualization

open access: yesNucleic Acids Res., 2019
PrankWeb is an online resource providing an interface to P2Rank, a state-of-the-art method for ligand binding site prediction. P2Rank is a template-free machine learning method based on the prediction of local chemical neighborhood ligandability centered
Lukás Jendele   +4 more
semanticscholar   +1 more source

Structural Analysis and Stochastic Modelling Suggest a Mechanism for Calmodulin Trapping by CaMKII [PDF]

open access: yes, 2012
Activation of CaMKII by calmodulin and the subsequent maintenance of constitutive activity through autophosphorylation at threonine residue 286 (Thr286) are thought to play a major role in synaptic plasticity. One of the effects of autophosphorylation at
Le Novère, Nicolas   +2 more
core   +4 more sources

Mild Hypogammaglobulinemia Can Be a Serious Condition

open access: yesFrontiers in Immunology, 2018
Background: Most patients with primary antibody deficiency (PAD) suffer from less well-described and understood forms of hypogammaglobulinemia (unclassified primary antibody deficiency, unPAD).
Lisanne M. A. Janssen   +10 more
doaj   +1 more source

Deep learning for MYC binding site recognition

open access: yesFrontiers in Bioinformatics, 2022
Motivation: The definition of the genome distribution of the Myc transcription factor is extremely important since it may help predict its transcriptional activity particularly in the context of cancer.
R. Fioresi, P. Demurtas, G. Perini
doaj   +1 more source

Ligand docking and binding site analysis with PyMOL and Autodock/Vina

open access: yesJ. Comput. Aided Mol. Des., 2010
Docking of small molecule compounds into the binding site of a receptor and estimating the binding affinity of the complex is an important part of the structure-based drug design process.
Daniel Seeliger, B. L. de Groot
semanticscholar   +1 more source

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