Results 51 to 60 of about 9,513 (205)

An unattended image‐processing pipeline for on‐the‐fly quality assessment and 3D exploration in cryo‐EM

Acta Crystallographica Section D, Volume 82, Issue 8, Page 915-939, August 2026.
We present a fully automated, unattended cryo‐EM pipeline that serves as an on‐the‐fly diagnostic tool, enabling rapid data‐quality assessment and informed decision‐making to maximize data‐collection efficiency.Single‐particle analysis (SPA) by cryogenic electron microscopy (cryo‐EM) has become a cornerstone of structural biology; yet, the workflow ...
Daniel Marchán Torres, Pablo Conesa, Alberto Garcia, Mikel Iceta, Ludovic Broche, Marcos Gragera, Romain Linares, Hok Sau Kwong, Francisco Javier Chichón, Olof Svensson, Rocío Arranz, Grégory Effantin, Eaazhisai Kandiah, José María Carazo, Carlos O. S. Sorzano   +14 more
wiley   +1 more source

Matrix-Chain Multiplication Based on Combinatorial Allosteric DNA Strand Displacement

IEEE Access
DNA computing has gained widespread attention for leveraging the unique properties of DNA molecules to perform computational operations. As a fundamental tool for analyzing data and optimizing models, matrix operation plays an important role in intensive
Hengyan Guo, Mingliang Wang, Xuedong Zheng   +2 more
doaj   +1 more source

UWB-Biocomputing/Graphitti: Someone please call 911, we have a code emergency

<p>First release of the Emergency Services Communications System (911) simulation domain.</p> <h2>What's Changed</h2> <ul> <li>hotfix: Changed development branch name by @stiber in https://github.com/UWB-Biocomputing ...
Jardi Martinez, Mark Sorvik, AlexNeary, Divya Kamath, rashwini21, Vikrant Verma, uw-theo, Lee Zee, Oelgazz, Star Wong ("Phoenix"), BenYang2002, Michael Stiber, Jordan Brown, Kyle Dukart, Surendran, Vivek Gandhi, Rastko Sarcevic, SANCHIT KUMAR, Jacob White, James Kim, Yunho C, Tori Salvatore, Conor McIntosh, Andrzej-Dawiec, xiang_coding, christopherdokeefe, Pooja Pal (PoojaPal2021)   +26 more
core   +1 more source

Proposal for open science session at Pacific Symposium on Biocomputing

, 2008
Friday is the deadline to submit letters of support for Shirley Wu's proposed Open Science session at the Pacific Symposium on Biocomputing. (Thanks to Bill Hooker.) <strong> Update. </strong> The proposal was approved.
Gavin Baker
core   +1 more source

Starting a synthetic biological intelligence lab from scratch

Patterns
Summary: Recent advances in artificial intelligence (AI) have led to the development and deployment of gigantic models trained on billions of samples.
Md Sayed Tanveer, Dhruvik Patel, Hunter E. Schweiger, Kwaku Dad Abu-Bonsrah, Brad Watmuff, Azin Azadi, Sergey Pryshchep, Karthikeyan Narayanan, Christopher Puleo, Kannathal Natarajan, Mohammed A. Mostajo-Radji, Brett J. Kagan, Ge Wang   +12 more
doaj   +1 more source

FSC-Q: a CryoEM map-to-atomic model quality validation based on the local Fourier shell correlation

Nature Communications, 2021
Here, the authors present a cryo-EM validation method for the local analysis of the map-to-model fit and introduce FSC-Q as a quality measure. FSC-Q provides a quantitative estimation of how much of the model is supported by the signal content of the map.
Erney Ramírez-Aportela, David Maluenda, Yunior C. Fonseca, Pablo Conesa, Roberto Marabini, J. Bernard Heymann, Jose Maria Carazo, Carlos Oscar S. Sorzano   +7 more
doaj   +1 more source

Exploring thylakoid emergence: evolution of membrane biogenesis and photosystem II assembly in early‐diverging cyanobacteria

New Phytologist, Volume 251, Issue 3, Page 1329-1343, August 2026.
Overview of the results. Phylogenetic analyses of 36 assembly factors of photosystem II (PSII) and 13 proteins involved in membrane dynamics summarized in Siebenaller & Schneider (2023) were performed to investigate the taxonomic distributions and structural differences between the thylakoid‐less Gloeobacterales and the Phycobacteria. Summary Thylakoid
Louise Hambücken, Denis Baurain, Luc Cornet   +2 more
wiley   +1 more source

Biocomputing 2014:Proceedings of the Pacific Symposium

, 2013
The Pacific Symposium on Biocomputing (PSB) 2014 is an international, multidisciplinary conference for the presentation and discussion of current research in the theory and application of computational methods in problems of biological significance ...
Russ B Altman, Lawrence Hunter, Teri E Klein, Tiffany A Murray, A Keith Dunker, Marylyn D Ritchie   +5 more
core   +1 more source

Mechanism of action of “cistanche deserticola–Polygala” in treating Alzheimer's disease based on network pharmacology methods and molecular docking analysis

IET Systems Biology
This article used network pharmacology, molecular docking, GEO analysis, and Gene Set Enrichment Analysis to obtain 38 main chemical components and 66 corresponding targets involved in Alzheimer's disease (AD) treatment in "Cistanche deserticola‐Polygala"
Shaoqiang Wang, Yifan Wang
doaj   +1 more source

SENSIBLE: SEquestered aNd SynergIstic BLockchain Ecosystem

Engineering Reports, 2023
Health care interoperability unfolds the way for personalized health care services at a reduced cost. Furthermore, a decentralized system holds the promise to prevent compromises such as cyber‐attacks due to data breaches.
Meghana Kshirsagar, Gauri Vaidya, Yao Yao, Smita Kasar, Conor Ryan   +4 more
doaj   +1 more source