Results 31 to 40 of about 640,321 (318)

Prediction and Analysis in silico of Genomic Islands in Aeromonas hydrophila

Frontiers in Microbiology, 2021
Aeromonas are Gram-negative rods widely distributed in the environment. They can cause severe infections in fish related to financial losses in the fish industry, and are considered opportunistic pathogens of humans causing infections ranging from ...
Antonio Camilo da Silva Filho, Jeroniza Nunes Marchaukoski, Roberto Tadeu Raittz, Camilla Reginatto De Pierri, Diogo de Jesus Soares Machado, Cyntia Maria Telles Fadel-Picheth, Geraldo Picheth   +6 more
doaj   +1 more source

Over-optimism in bioinformatics: an illustration [PDF]

, 2010
In statistical bioinformatics research, different optimization mechanisms potentially lead to "over-optimism" in published papers. The present empirical study illustrates these mechanisms through a concrete example from an active research field.
Arthur, Tenenhaus, Arthur Tenenhaus, Strimmer, Korbinian, Strimmer, K., Boulesteix, Anne-Laure, Monika, Jelizarow, Vincent Guillemot, Vincent, Guillemot, Tenenhaus, Arthur, Anne-Laure Boulesteix, Guillemot, Vincent, Monika Jelizarow, Jelizarow, Monika, Korbinian Strimmer, Anne-Laure, Boulesteix, Korbinian, Strimmer   +15 more
core   +1 more source

Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing

BMC Genomics, 2023
Background Most plant-pathogenic Xanthomonas bacteria harbor transcription activator-like effector (TALE) genes, which function as transcriptional activators of host plant genes and support infection.
Annett Erkes, René P. Grove, Milena Žarković, Sebastian Krautwurst, Ralf Koebnik, Richard D. Morgan, Geoffrey G. Wilson, Martin Hölzer, Manja Marz, Jens Boch, Jan Grau   +10 more
doaj   +1 more source

Network analysis of hepatocellular carcinoma liquid biopsies augmented by single-cell sequencing data

Frontiers in Genetics, 2022
Liquid biopsy, the analysis of body fluids, represents a promising approach for disease diagnosis and prognosis with minimal intervention. Sequencing cell-free RNA derived from liquid biopsies has been very promising for the diagnosis of several diseases.
Aram Safrastyan, Aram Safrastyan, Damian Wollny, Damian Wollny, Damian Wollny   +4 more
doaj   +1 more source

Agents in Bioinformatics [PDF]

, 2005
The scope of the Technical Forum Group (TFG) on Agents in Bioinformatics (BIOAGENTS) was to inspire collaboration between the agent and bioinformatics communities with the aim of creating an opportunity to propose a different (agent-based) approach to ...
LUCK M., Luck, M, Merelli, E, Luck, Michael; id_orcid, MERELLI, Emanuela   +4 more
core   +1 more source

The bioinformatics toolbox for circRNA discovery and analysis [PDF]

, 2020
Circular RNAs (circRNAs) are a unique class of RNA molecule identified more than 40 years ago which are produced by a covalent linkage via back-splicing of linear RNA.
Chen, Liang, Yanchun Liang, Juexin Wang, Huiyan Sun, Lian, Yanchun, Garry Wong, Wang, Yan, Wong, Garry, Sun, Huiyan, Liang Chen, Wang, Juexin, Changliang Wang, Yan Wang, Wang, Changliang   +13 more
core   +2 more sources

A comprehensive multi-omics analysis reveals molecular features associated with cancer via RNA cross-talks in the Notch signaling pathway

Computational and Structural Biotechnology Journal, 2022
The Notch signaling has an important role in multiple cellular processes and is related to carcinogenic process. To understand the potential molecular features of the crucial Notch pathway, a comprehensive multi-omics analysis is performed to explore its
Li Guo, Sunjing Li, Xiaoqiang Yan, Lulu Shen, Daoliang Xia, Yiqi Xiong, Yuyang Dou, Lan Mi, Yujie Ren, Yangyang Xiang, Dekang Ren, Jun Wang, Tingming Liang   +12 more
doaj   +1 more source

Data Analysis and Bioinformatics [PDF]

, 2007
Data analysis methods and techniques are revisited in the case of biological data sets. Particular emphasis is given to clustering and mining issues. Clustering is still a subject of active research in several fields such as statistics, pattern recognition, and machine learning.
openaire   +3 more sources

Modelling the bioinformatics tertiary analysis research process [PDF]

, 2021
Background: With the advancements of Next Generation Techniques, a tremendous amount of genomic information has been made available to be analyzed by means of computational methods.
PIDO' S., Garzotto F., Crovari P.
core   +1 more source

Bioinformatic Resources for in Silico Proteome Analysis [PDF]

BioMed Research International, 2003
In the growing field of proteomics, tools for the in silico analysis of proteins and even of whole proteomes are of crucial importance to make best use of the accumulating amount of data. To utilise this data for healthcare and drug development, first the characteristics of proteomes of entire species—mainly the human—have to be understood, before ...
Pruess, Manuela, Apweiler, Rolf
openaire   +2 more sources