Results 41 to 50 of about 22,135,367 (247)

Prediction and Analysis in silico of Genomic Islands in Aeromonas hydrophila

Frontiers in Microbiology, 2021
Aeromonas are Gram-negative rods widely distributed in the environment. They can cause severe infections in fish related to financial losses in the fish industry, and are considered opportunistic pathogens of humans causing infections ranging from ...
Antonio Camilo da Silva Filho, Jeroniza Nunes Marchaukoski, Roberto Tadeu Raittz, Camilla Reginatto De Pierri, Diogo de Jesus Soares Machado, Cyntia Maria Telles Fadel-Picheth, Geraldo Picheth   +6 more
doaj   +1 more source

Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing

BMC Genomics, 2023
Background Most plant-pathogenic Xanthomonas bacteria harbor transcription activator-like effector (TALE) genes, which function as transcriptional activators of host plant genes and support infection.
Annett Erkes, René P. Grove, Milena Žarković, Sebastian Krautwurst, Ralf Koebnik, Richard D. Morgan, Geoffrey G. Wilson, Martin Hölzer, Manja Marz, Jens Boch, Jan Grau   +10 more
doaj   +1 more source

The GOBLET Training Portal: A Global Repository of Bioinformatics Training Materials, Courses and Trainers [PDF]

, 2015
SUMMARY: Rapid technological advances have led to an explosion of biomedical data in recent years. The pace of change has inspired new, collaborative approaches for sharing materials and resources to help train life scientists both in the use of cutting ...
Taylor, J., Attwood, Teresa K, Bongcam-Rudloff, E, Gaeta, Bruno, Rother, K, Taylor, J, Gaeta, B., Budd, A, Fernandes, PL, Van Gelder, C., Jimenez, Rafael C, Bongcam-Rudloff, Erik, Fernandes, Pedro L, Watson, M., MacLean, Daniel, Via, A., Fernandes, P.L., Rother, Kristian, Corpas, M., Schneider, M.V., Watson, M, Palagi, PM, Brazas, Michelle D, Via, Allegra, Via, A, Taylor, Jan, MacLean, D, Fernandes, Pedro L., Budd, A., Brazas, M.D., Palagi, Patricia M., Watson, Mick, McGrath, A, Jimenez, Rafael C., Rother, K., Attwood, TK, Korpelainen, Eija, Brazas, MD, Lewitter, F., Attwood, Teresa K., Van Gelder, C, Korpelainen, E., Corpas, Manuel, McGrath, Annette, McGrath, A., Bongcam-Rudloff, E., Bongcam Rudloff, Erik, Corpas, M, Palagi, P.M., Brazas, Michelle D., Budd, Aidan, Korpelainen, E, Lewitter, F, Jimenez, R.C., Schneider, Maria Victoria, Gaeta, B, Lewitter, Fran, Palagi, Patricia M, Schneider, MV, van Gelder, Celia, Jimenez, RC, MacLean, D., Attwood, T.K.   +62 more
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A comprehensive multi-omics analysis reveals molecular features associated with cancer via RNA cross-talks in the Notch signaling pathway

Computational and Structural Biotechnology Journal, 2022
The Notch signaling has an important role in multiple cellular processes and is related to carcinogenic process. To understand the potential molecular features of the crucial Notch pathway, a comprehensive multi-omics analysis is performed to explore its
Li Guo, Sunjing Li, Xiaoqiang Yan, Lulu Shen, Daoliang Xia, Yiqi Xiong, Yuyang Dou, Lan Mi, Yujie Ren, Yangyang Xiang, Dekang Ren, Jun Wang, Tingming Liang   +12 more
doaj   +1 more source

Data Analysis and Bioinformatics [PDF]

, 2007
Data analysis methods and techniques are revisited in the case of biological data sets. Particular emphasis is given to clustering and mining issues. Clustering is still a subject of active research in several fields such as statistics, pattern recognition, and machine learning.
openaire   +3 more sources

Network analysis of hepatocellular carcinoma liquid biopsies augmented by single-cell sequencing data

Frontiers in Genetics, 2022
Liquid biopsy, the analysis of body fluids, represents a promising approach for disease diagnosis and prognosis with minimal intervention. Sequencing cell-free RNA derived from liquid biopsies has been very promising for the diagnosis of several diseases.
Aram Safrastyan, Aram Safrastyan, Damian Wollny, Damian Wollny, Damian Wollny   +4 more
doaj   +1 more source

Over-optimism in bioinformatics: an illustration [PDF]

, 2010
In statistical bioinformatics research, different optimization mechanisms potentially lead to "over-optimism" in published papers. The present empirical study illustrates these mechanisms through a concrete example from an active research field.
Arthur, Tenenhaus, Arthur Tenenhaus, Strimmer, Korbinian, Strimmer, K., Boulesteix, Anne-Laure, Monika, Jelizarow, Vincent Guillemot, Vincent, Guillemot, Tenenhaus, Arthur, Anne-Laure Boulesteix, Guillemot, Vincent, Monika Jelizarow, Jelizarow, Monika, Korbinian Strimmer, Anne-Laure, Boulesteix, Korbinian, Strimmer   +15 more
core   +1 more source

Bioinformatics: making large-scale science happen [PDF]

, 2012
Podeu consultar el llibre complet a: http://hdl.handle.net/2445/32166Bionformatics is a rapidly evolving research field dedicated to analyzing and managing biological data with computational resources.
Beltran i Agulló, Sergi
core   +6 more sources

Bioinformatic Resources for in Silico Proteome Analysis [PDF]

BioMed Research International, 2003
In the growing field of proteomics, tools for the in silico analysis of proteins and even of whole proteomes are of crucial importance to make best use of the accumulating amount of data. To utilise this data for healthcare and drug development, first the characteristics of proteomes of entire species—mainly the human—have to be understood, before ...
Pruess, Manuela, Apweiler, Rolf
openaire   +2 more sources

Exploring the impact of primer length on efficient gene detection via high-throughput sequencing

Nature Communications
Reverse transcription (RT) is a crucial step in most RNA analysis methods. Optimizing protocols for this initial stage is critical for effective target detection, particularly when working with limited input RNA.
Julia Micheel, Aram Safrastyan, Franziska Aron, Damian Wollny   +3 more
doaj   +1 more source