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Conditional Screening for Ultra-high Dimensional Covariates with Survival Outcomes [PDF]

open access: yesarXiv, 2016
Identifying important biomarkers that are predictive for cancer patients' prognosis is key in gaining better insights into the biological influences on the disease and has become a critical component of precision medicine. The emergence of large-scale biomedical survival studies, which typically involve excessive number of biomarkers, has brought high ...
Hong, Hyokyoung Grace   +2 more
arxiv   +5 more sources

A machine learning approach toward automating spatial identification of LAG3+/CD3+ cells in ulcerative colitis

open access: yesScientific Reports, 2023
Over the past decade, automation of digital image analysis has become commonplace in both research and clinical settings. Spurred by recent advances in artificial intelligence and machine learning (AI/ML), tissue sub-compartments and cellular phenotypes ...
Edward D. Bonnevie   +7 more
doaj   +1 more source

Citrullinated and MMP-degraded vimentin is associated with chronic pulmonary diseases and genetic variants in PADI3/PADI4 and CFH in postmenopausal women

open access: yesScientific Reports, 2023
Citrullinated vimentin has been linked to several chronic and autoimmune diseases, but how citrullinated vimentin is associated with disease prevalence and genetic variants in a clinical setting remains unknown.
Cecilie Liv Bager   +8 more
doaj   +1 more source

Serological assessment of collagen fragments and tumor fibrosis may guide immune checkpoint inhibitor therapy

open access: yesJournal of Experimental & Clinical Cancer Research, 2021
Despite the overall clinical success of immune checkpoint inhibitors (ICIs) for treating patients with solid tumors, a large number of patients do not benefit from this approach. Consequently, there is a need for predictive biomarkers. The most prevalent
Christina Jensen   +4 more
doaj   +1 more source

Intermittent Dynamic Compression Confers Anabolic Effects in Articular Cartilage

open access: yesApplied Sciences, 2021
(1) Background: Mechanical loading is an essential part of the function and maintenance of the joint. Despite the importance of intermittent mechanical loading, this factor is rarely considered in preclinical models of cartilage, limiting their ...
Amalie Engstrøm   +6 more
doaj   +1 more source

The activation fragment of PAR2 is elevated in serum from patients with rheumatoid arthritis and reduced in response to anti-IL6R treatment

open access: yesScientific Reports, 2021
Osteoarthritis (OA) and rheumatoid arthritis (RA) are serious and painful diseases. Protease-activated receptor 2 (PAR2) is involved in the pathology of both OA and RA including roles in synovial hyperplasia, cartilage destruction, osteophyogenesis and ...
Stefania Kalogera   +7 more
doaj   +1 more source

Lot-to-Lot Variance in Immunoassays—Causes, Consequences, and Solutions

open access: yesDiagnostics, 2023
Immunoassays, which have gained popularity in clinical practice and modern biomedical research, play an increasingly important role in quantifying various analytes in biological samples.
Yunyun Luo   +5 more
doaj   +1 more source

NTSR1 glycosylation and MMP dependent cleavage generate three distinct forms of the protein

open access: yesScientific Reports, 2023
NTSR1 abnormal expression by cancer cells makes it a strategic target for antitumoral therapies, such as compounds that use NTSR1 binding probes to deliver cytotoxic agents to tumor cells.
Fotine Libanje   +6 more
doaj   +1 more source

Environmental risk factors and their footprints in vivo – a proposal for the classification of oxidative stress biomarkers [PDF]

open access: yes, 2020
Environmental agents, including socioeconomic condition, and host factors can act as causal agents and risk factors in disease. We use biomarkers and sociomarkers to study causal factors, such as overproduction of reactive oxygen species (ROS) which ...
Ghezzi, Pietro
core   +1 more source

MiR-151a: a robust endogenous control for normalizing small extracellular vesicle cargo in human cancer

open access: yesBiomarker Research, 2023
Small extracellular vesicles (sEVs) in the blood of cancer patients contain higher amounts of tumor markers than those identified as free-circulating.
Miranda Burdiel   +17 more
doaj   +1 more source

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