Results 61 to 70 of about 216,910 (182)

Elasticity Theory and Shape Transitions of Viral Shells

open access: yes, 2005
Recently, continuum elasticity theory has been applied to explain the shape transition of icosahedral viral capsids - single-protein-thick crystalline shells - from spherical to buckled/faceted as their radius increases through a critical value ...
B. K. Ganser   +9 more
core   +1 more source

How simple can a model of an empty viral capsid be? Charge distributions in viral capsids

open access: yes, 2012
We investigate and quantify salient features of the charge distributions on viral capsids. Our analysis combines the experimentally determined capsid geometry with simple models for ionization of amino acids, thus yielding the detailed description of ...
A Lošdorfer Božič   +37 more
core   +1 more source

Properties and Functions of the Dengue Virus Capsid Protein.

open access: yesAnnual Review of Virology, 2016
Dengue virus affects hundreds of millions of people each year around the world, causing a tremendous social and economic impact on affected countries.
Laura A. Byk, A. Gamarnik
semanticscholar   +1 more source

A Liquid Crystal Model of Viral DNA Encapsidation

open access: yes, 2017
A liquid crystal continuum modeling framework for icosahedra bacteriophage viruses is developed and tested. The main assumptions of the model are the chromonic columnar hexagonal structure of confined DNA, the high resistance to bending and the phase ...
Arsuaga, Javier   +3 more
core  

Cyclophilin A stabilizes the HIV-1 capsid through a novel non-canonical binding site

open access: yesNature Communications, 2016
The host cell factor cyclophilin A (CypA) interacts directly with the HIV-1 capsid and regulates viral infectivity. Although the crystal structure of CypA in complex with the N-terminal domain of the HIV-1 capsid protein (CA) has been known for nearly ...
Chuang Liu   +17 more
semanticscholar   +1 more source

Modeling capsid self-assembly: Design and analysis

open access: yes, 2010
A series of simulations aimed at elucidating the self-assembly dynamics of spherical virus capsids is described. This little-understood phenomenon is a fascinating example of the complex processes that occur in the simplest of organisms.
Rapaport, D. C.
core   +1 more source

Coarse-grained simulation reveals key features of HIV-1 capsid self-assembly

open access: yesNature Communications, 2016
The maturation of HIV-1 viral particles is essential for viral infectivity. During maturation, many copies of the capsid protein (CA) self-assemble into a capsid shell to enclose the viral RNA.
John M. A. Grime   +6 more
semanticscholar   +1 more source

The Astrovirus Capsid: A Review

open access: yesViruses, 2017
Astroviruses are enterically transmitted viruses that cause infections in mammalian and avian species. Astroviruses are nonenveloped, icosahedral viruses comprised of a capsid protein shell and a positive-sense, single-stranded RNA genome.
C. Arias, R. DuBois
semanticscholar   +1 more source

A minimal representation of the self-assembly of virus capsids

open access: yes, 2013
Viruses are biological nanosystems with a capsid of protein-made capsomer units that encloses and protects the genetic material responsible for their replication.
Breton, J.   +2 more
core   +1 more source

Dynamic regulation of HIV-1 capsid interaction with the restriction factor TRIM5α identified by magic-angle spinning NMR and molecular dynamics simulations

open access: yesProceedings of the National Academy of Sciences of the United States of America, 2018
Significance The mechanisms of how TRIM5α interferes with the integrity of the HIV-1 capsid to restrict HIV-1 infectivity remain poorly understood. We examined, at atomic resolution, the interactions with TRIM5α in the assembled capsid and the dynamics ...
Caitlin M. Quinn   +8 more
semanticscholar   +1 more source

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