Results 81 to 90 of about 11,666 (204)

Insights into tandem dioxygenases—copper radical oxidases in fungal Phytopathogens of the Colletotrichum acutatum species complex

The FEBS Journal, EarlyView.
In Colletotrichum acutatum species complex, conserved ring‐cleavage dioxygenases located adjacent to AA5_2 enzymes were investigated as potential redox partners. Biochemical analyses identified the dioxygenases as intradiol‐cleaving enzymes preferentially oxidizing methyl‐substituted catechols, while AA5_2 enzymes displayed weak alcohol oxidase ...
Radka Končitíková, David Ribeaucourt, Mireille Haon, David Navarro, Elodie Drula, Bastien Bissaro, Jean‐Guy Berrin, Mickael Lafond   +7 more
wiley   +1 more source

Aridity Structures the Microbial Potential for Carbon Cycling and Mediates the Impact of Mammal Bioturbation at the Continental Scale

Journal of Sustainable Agriculture and Environment
Introduction In Australia, the historical loss of native digging mammals has profoundly changed ecosystems and their functioning. However, little is known about how the decline in digging mammal presence alters microbes and their functional potential and
Eleonora Egidi, Orsi Decker, Claudia Coleine, Davide Albanese, Heloise Gibb   +4 more
doaj   +1 more source

Comparative analysis of the number of putative CAZy sequences in selected Clostridial species.

, 2014
Comparative analysis of the number of putative CAZy sequences in selected Clostridial species.
John Schellenberg (610765), Bernard Henrissat (31550), Richard Sparling (394480), Riffat I. Munir (610764), David B. Levin (330149), Tobin J. Verbeke (394474)   +5 more
core   +1 more source

First genome sequence of a European Alternaria brassicae isolate and genes involved in early development of alternaria leaf spot on Brassica juncea

Pest Management Science, Volume 82, Issue 11, Page 10841-10854, November 2026.
This article reports the first genome sequence of a UK Alternaria brassicae isolate. Dual RNA‐sequencing profiling of A. brassicae‐infected Brassica juncea leaves identified differentially expressed genes involved in pathogenicity and host response pathways in moderately resistant Sej‐2 (2) and moderately susceptible Pusa Jaikisan cultivars.
Kevin M. King, Graham McLaughlin, Chinthani S. Karandeni Dewage, Zedi Gao, David J. Hughes, Jonathan S. West, Henrik U. Stotz   +6 more
wiley   +1 more source

CAZymes in fungal genomes found by PPR and annotated in CAZy.

, 2014
CAZymes in fungal genomes found by PPR and annotated in CAZy.
Peter K. Busk (668391), Mette Lange (668392), Bo Pilgaard (668393), Lene Lange (668394)   +3 more
core   +1 more source

Predicting Functional Diversity Within Enzyme Families: A Practical Perspective

ChemBioChem, Volume 27, Issue 19, 14 October 2026.
Integrating machine learning into enzyme discovery requires navigating the trade‐offs between data quantity and quality. This article provides a best‐practice framework for developing robust predictors, focusing on mitigating bias in biochemical datasets, implementing systematic “cold‐drug” validation strategies, and utilizing explainable artificial ...
Nika Sokolova, Kristina Haslinger
wiley   +1 more source

Enzymes from the BRENDA and CAZy databases annotated with organism growth temperatures and predicted Topt

, 2019
This repo is an updated version of repo Gang Li, & Martin KM Engqvist. (2019). Enzymes from the BRENDA database annotated with organism growth temperatures and predicted Topt (Version 1.0) [Data set]. Zenodo.
Gang Li, Gang Li (34549), Martin KM Engqvist (6173132), Martin KM Engqvist   +3 more
core   +1 more source

CANDy: Automated analysis of domain architectures in carbohydrate-active enzymes.

PLoS ONE
Carbohydrate-active enzymes (CAZymes) can be found in all domains of life and play a crucial role in metabolic and physiological processes. CAZymes often possess a modular structure, comprising not only catalytic domains but also associated domains such ...
Alex Windels, Jorick Franceus, Jürgen Pleiss, Tom Desmet   +3 more
doaj   +1 more source

Fibrolytic capacity of the gut microbiome in captive African elephants (Loxodonta africana): a pilot study

Frontiers in Veterinary Science
African elephants (Loxodonta africana) depend on the fibrolytic capacity of their gut microbiome (GMB) to efficiently utilize fibrous plant material. However, knowledge is missing on the temporal stability and functional dynamics (especially fibrolytic ...
Barbara U. Metzler-Zebeli, Folko Balfanz, Fritz Vollrath, Fritz Vollrath   +3 more
doaj   +1 more source

Per cent contribution of key cellulolytic bacteria in total GH and CBM CAZy families.

, 2017
Per cent contribution of key cellulolytic bacteria in total GH and CBM CAZy families.
L. C. Chaudhary (3753712), D. N. Kamra (3753715), Avinash Kumar (368828), C. G. Joshi (3753709), Anju Kala (3753718), Neeta Agarwal (3753721)   +5 more
core   +1 more source