Results 261 to 270 of about 141,333 (294)
Some of the next articles are maybe not open access.
ChIP-Seq and the Complexity of Bacterial Transcriptional Regulation
2012Transcription factors (TFs) play a central role in regulating gene expression in all bacteria. Yet, until recently, studies of TF binding were limited to a small number of factors at a few genomic locations. Chromatin immunoprecipitation followed by sequencing enables mapping of binding sites for TFs in a global and high-throughput fashion.
James, Galagan +2 more
openaire +2 more sources
Modelling ChIP-seq Data Using HMMs
2017Chromatin ImmunoPrecipitation-sequencing (ChIP-seq) experiments have now become routine in biology for the detection of protein binding sites. In this chapter, we show how hidden Markov models can be used for the analysis of data generated by ChIP-seq experiments.
openaire +2 more sources
2015
Introduction to ChIP-seq data analysis. Overview of quality control, mapping, peak calling and downstream analysis methods.
openaire
Introduction to ChIP-seq data analysis. Overview of quality control, mapping, peak calling and downstream analysis methods.
openaire
Methods for ChIP-seq analysis: A practical workflow and advanced applications
Methods, 2021Ryuichiro Nakato, Toyonori Sakata
exaly
CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-Seq Analysis
Genomics, Proteomics and Bioinformatics, 2021Xintao Qiu, Avery Feit, Yingtian Xie
exaly
ChIP-R: Assembling reproducible sets of ChIP-seq and ATAC-seq peaks from multiple replicates
Genomics, 2021Brad Balderson +2 more
exaly
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data
Frontiers in Genetics, 2014Thomas S Carroll +2 more
exaly
ChIP-seq: Using high-throughput sequencing to discover protein–DNA interactions
Methods, 2009Dominic Schmidt +2 more
exaly