Results 211 to 220 of about 49,031 (262)

Integrative analysis of co-expression networks and codon usage bias in maize under biotic stress. [PDF]

PLoS One
Zinati Z, Nazari L.
europepmc   +1 more source

Mitochondrial Genomes of Three Species of the Family Camaenidae (Gastropoda: Stylommatophora): Structural Features, Codon Usage Patterns, and Phylogenetic Implications. [PDF]

Ecol Evol
Ran XM, He HY, Yang L, Long JK, Chang ZM, Li Z, Gao J, Chen XS.   +7 more
europepmc   +1 more source

Analysis of synonymous codon usage bias of Lassa virus. [PDF]

Virus Res
Rahman SU, Hu Y, Rehman HU, Alrashed MM, Attia KA, Ullah U, Liang H.   +6 more
europepmc   +1 more source

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On codon usage

Nature, 1979
SCOPUS: ar.j ; info:eu-repo/semantics ...
Fiers, Walter, Grosjean, Henri
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Estimate Codon Usage Bias Using Codon Usage Analyzer (CUA)

2017
One amino acid is added to a growing peptide by a ribosome through reading triple nucleotides, i.e., a codon, each time. Twenty species of amino acids are often coded by 61 codons, so one amino acid can be coded by more than one codon and the codons coding the same amino acid are called synonymous. Intriguingly, synonymous codons' usage is often uneven:
Zhenguo, Zhang, Gaurav, Sablok
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Codon usage divergence of homologous vertebrate genes and codon usage clock

Journal of Molecular Evolution, 1991
This paper is concerned with the divergence of synonymous codon usage and its bias in three homologous genes within vertebrate species. Genetic distances among species are described in terms of synonymous codon usage divergence and the correlation is found between the genetic distances and taxonomic distances among species under study.
M, Long, J H, Gillespie
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Codon usage in Aspergillus nidulans

Molecular and General Genetics MGG, 1991
Synonymous codon usage in genes from the ascomycete (filamentous) fungus Aspergillus nidulans has been investigated. A total of 45 gene sequences has been analysed. Multivariate statistical analysis has been used to identify a single major trend among genes.
A T, Lloyd, P M, Sharp
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CHARMING : Harmonizing synonymous codon usage to replicate a desired codon usage pattern

Protein Science, 2021
Abstract There is a growing appreciation that synonymous codon usage, although historically regarded as phenotypically silent, can instead alter a wide range of mechanisms related to functional protein production, a term we use here to describe the net effect of transcription (mRNA synthesis), mRNA half‐life ...
Gabriel Wright, Anabel Rodriguez, Jun Li, Tijana Milenkovic, Scott J. Emrich, Patricia L. Clark   +5 more
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Codon Usage

1993
Abstract In most genes in most species, alternative synonymous codons are not used in equal frequencies (Aota et al. 1988)—Drosophila is no exception (Ashburner et al. 1984; O’Connell and Rosbash 1984; Shields et al. 1988). In Table 37.1 we present the total codon usage for 438 D. melanogaster genes.
Paul M Sharp, Andrew T Lloyd
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Preferential codon usage in genes

Gene, 1981
We present a method which permits comparison of the preferential use of degenerate codons within any gene. The method makes use of the triplet frequencies in the noncoding frames to assess whether a preference is specific to the reading frame. Preference is given a statistical meaning by use of the analysis of variance coupled to Duncan's multiple ...
S, Wain-Hobson, R, Nussinov, R J, Brown, J L, Sussman   +3 more
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