Results 51 to 60 of about 3,767,606 (374)
Fractals in DNA sequence analysis
Chinese Physics, 2002 Fractal methods have been successfully used to study many problems in physics, mathematics, engineering, finance and even in biology. There has been an increasing interest in unravelling the mysteries of DNA; for example, how can we distinguish coding and noncoding sequences and the problems of classification and evolution relationship of organisms are
Vo Anh +4 more
openaire +3 more sources
Mesoscopic Model for Free Energy Landscape Analysis of DNA sequences [PDF]
, 2012 A mesoscopic model which allows us to identify and quantify the strength of binding sites in DNA sequences is proposed. The model is based on the Peyrard-Bishop-Dauxois model for the DNA chain coupled to a Brownian particle which explores the sequence ...
D. Prada-Gracia +8 more
core +3 more sources
Review on the Application of Machine Learning Algorithms in the Sequence Data Mining of DNA
Frontiers in Bioengineering and Biotechnology, 2020 Deoxyribonucleic acid (DNA) is a biological macromolecule. Its main function is information storage. At present, the advancement of sequencing technology had caused DNA sequence data to grow at an explosive rate, which has also pushed the study of DNA ...
Aimin Yang +5 more
doaj +1 more source
DNA and its counterions: A molecular dynamics study [PDF]
, 2004 The behaviour of mobile counterions, Na+ and K+, was analysed around a B-DNA double helix with the sequence CCATGCGCTGAC in aqueous solution during two 50 ns long molecular dynamics trajectories.
Varnai, Peter, Zakrzewska, Krystyna
core +3 more sources
A DNA Structure-Based Bionic Wavelet Transform and Its Application to DNA Sequence Analysis
Applied Bionics and Biomechanics, 2003 DNA sequence analysis is of great significance for increasing our understanding of genomic functions. An important task facing us is the exploration of hidden structural information stored in the DNA sequence.
Fei Chen, Yuan-Ting Zhang
doaj +1 more source
Mitochondrial DNA D-loop Sequence Analysis of Busha Cattle
Acta Universitatis Agriculturae et Silviculturae Mendelianae Brunensis, 2019 Maintaining the genetic diversity of autochthonous breeds is very important and should be included in animal breeding strategies and conservation plans with the aim to preserve animals, adapted to variety of husbandry systems and different environmental ...
Polona Margeta, Vladimir Margeta
doaj +1 more source
Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. Using the relative complexity measure [PDF]
, 2013 Background: Most phylogeny analysis methods based on molecular sequences use multiple alignment where the quality of the alignment, which is dependent on the alignment parameters, determines the accuracy of the resulting trees.
Bakis, Yasin +11 more
core +2 more sources
ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis
Nucleic Acids Research, 2011 Using non-conventional markers, DNA metabarcoding allows biodiversity assessment from complex substrates. In this article, we present ecoPrimers, a software for identifying new barcode markers and their associated PCR primers.
Tiayyba Riaz +5 more
semanticscholar +1 more source
, 2015 We perform a statistical study of the distances between successive occurrencies of a given dinucleotide in the DNA sequence for a number of organisms of different complexity.
Castellani, Gastone C. +6 more
core +1 more source
Evolutionary interplay between viruses and R‐loops
FEBS Letters, EarlyView.Viruses interact with specialized nucleic acid structures called R‐loops to influence host transcription, epigenetic states, latency, and immune evasion. This Perspective examines the roles of R‐loops in viral replication, integration, and silencing, and how viruses co‐opt or avoid these structures.
Zsolt Karányi +4 more
wiley +1 more source