Results 31 to 40 of about 3,653,794 (230)

Genomic Features Predict Bacterial Life History Strategies in Soil, as Identified by Metagenomic Stable Isotope Probing

mBio, 2023
Bacteria catalyze the formation and destruction of soil organic matter, but the bacterial dynamics in soil that govern carbon (C) cycling are not well understood.
Samuel E. Barnett, Rob Egan, Brian Foster, Emiley A. Eloe-Fadrosh, Daniel H. Buckley   +4 more
doaj   +1 more source

Molecular Ecology of Isoprene-Degrading Bacteria

Microorganisms, 2020
Isoprene is a highly abundant biogenic volatile organic compound (BVOC) that is emitted to the atmosphere in amounts approximating to those of methane.
Ornella Carrión, Terry J. McGenity, J. Colin Murrell   +2 more
doaj   +1 more source

Oceanospirillales containing the DMSP lyase DddD are key utilisers of carbon from DMSP in coastal seawater

Microbiome, 2022
Background Ubiquitous and diverse marine microorganisms utilise the abundant organosulfur molecule dimethylsulfoniopropionate (DMSP), the main precursor of the climate-active gas dimethylsulfide (DMS), as a source of carbon, sulfur and/or signalling ...
Jingli Liu, Chun-Xu Xue, Jinyan Wang, Andrew T. Crombie, Ornella Carrión, Andrew W. B. Johnston, J. Colin Murrell, Ji Liu, Yanfen Zheng, Xiao-Hua Zhang, Jonathan D. Todd   +10 more
doaj   +1 more source

Identification of Benzo[a]pyrene-metabolizing bacteria in forest soils by using DNA-based stable-isotope probing [PDF]

, 2015
DNA-based stable-isotope probing (DNA-SIP) was used in this study to investigate the uncultivated bacteria with benzo[a]pyrene (BaP) metabolism capacities in two Chinese forest soils (Mt. Maoer in Heilongjiang Province and Mt. Baicaowa in Hubei Province).
Wang, Yujie, Luo, Chunling, Song, Mengke, Zhang, Gan, Jiang, Longfei, Zhang, Dayi   +5 more
core   +1 more source

DNA stable-isotope probing

, 2007
Stable-isotope probing is a method used in microbial ecology that provides a means by which specific functional groups of organisms that incorporate particular substrates are identified without the prerequisite of cultivation.
Marc G Dumont, Neufeld, J.D., Dumont, Marc G, Murrell, J. C. (J. Colin), Neufeld, Josh D, Friedrich, M., Neufeld, J., Dumont, Marc G., Friedrich, Michael W., Lueders, T., Jyotsna Vohra, Michael W Friedrich, Dumont, M.G., Murrell, J. Colin, Dumont, M., Lüders, T., Manefield, M., Vohra, Jyotsna, Manefield, Mike, Vohra, J., Friedrich, M.W., J Colin Murrell, Josh D Neufeld, Murrell, J., Murrell, J Colin, Mike Manefield, Neufeld, Josh D., Tillmann Lueders, Lueders, Tillmann, Friedrich, Michael W, Murrell, J.C.   +30 more
core   +1 more source

Organic Matter Micro-Interfaces Change Glyphosate Partitioning and Alter Active Glyphosate Degraders in Soils

Agriculture
Soil microorganisms are responsible for natural glyphosate dissipation. However, previous studies have largely focused on bulk soils, and the underlying microscale mechanisms remain poorly resolved.
Shuwen Luo, Yijie Chen, Yucheng Xie, Yuhao Jia, Jing Gao, Xiankun Huang, Zhong Lin, Dayi Zhang   +7 more
doaj   +1 more source

Identification of diverse antibiotic resistant bacteria in agricultural soil with H2 18O stable isotope probing combined with high-throughput sequencing

Environmental Microbiome, 2023
Background We aimed to identify bacteria able to grow in the presence of several antibiotics including the ultra-broad-spectrum antibiotic meropenem in a British agricultural soil by combining DNA stable isotope probing (SIP) with high throughput ...
Marcela Hernández, Shamik Roy, C. William Keevil, Marc G. Dumont   +3 more
doaj   +1 more source

Applications of DNA-Stable Isotope Probing in Bioremediation Studies

, 2009
DNA-stable isotope probing, a method to identify active microorganisms without the prerequisite of cultivation, has been widely applied in the study of microorganisms involved in the degradation of environmental pollutants.
Chen, Yin, J. Colin Murrell, Vohra, Jyotsna, Murrell, J. C. (J. Colin), Yin Chen, Jyotsna Vohra   +5 more
core   +1 more source

Evaluating the accuracy of DNA stable isotope probing

, 2017
Originality-Significance StatementBy combining DNA Stable Isotope Probing (DNA-SIP) with multiplexed high throughput DNA sequencing (HTS-DNA-SIP), it is now possible to identify patterns of isotope incorporation for thousands of microbial taxa.
Daniel H. Buckley, Nicholas D. Youngblut
core   +1 more source

¹⁵N stable isotope probing of pulp and paper wastewaters [PDF]

, 2008
Stable isotope probing (SIP) is an established technique that can be applied to identify the metabolically active micro-organisms within a microbial population.
Addison, Sarah Louise
core