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An Operational DNA Strand Displacement Encryption Approach [PDF]

open access: yesNanomaterials, 2022
DeoxyriboNucleic Acid (DNA) encryption is a new encryption method that appeared along with the research of DNA nanotechnology in recent years. Due to the complexity of biology in DNA nanotechnology, DNA encryption brings in an additional difficulty in ...
Enqiang Zhu   +3 more
doaj   +8 more sources

Two-Domain DNA Strand Displacement [PDF]

open access: yesElectronic Proceedings in Theoretical Computer Science, 2010
We investigate the computing power of a restricted class of DNA strand displacement structures: those that are made of double strands with nicks (interruptions) in the top strand.
Luca Cardelli
doaj   +7 more sources

Three-input logic gate based on DNA strand displacement reaction [PDF]

open access: yesScientific Reports, 2023
In this paper, three kinds of three-input logic gates are designed based on DNA strand displacement reaction, which are three-input OR logic gate, three-input AND logic gate, and three-input MAJORITY logic gate.
M. A. Jingjing
doaj   +3 more sources

Sequential super-resolution imaging using DNA strand displacement. [PDF]

open access: yesPLoS ONE, 2018
Sequential labeling and imaging in fluorescence microscopy allows the imaging of multiple structures in the same cell using a single fluorophore species.
Sandeep Pallikkuth   +6 more
doaj   +3 more sources

A novel bio-sensor based on DNA strand displacement. [PDF]

open access: yesPLoS ONE, 2014
DNA strand displacement technology performs well in sensing and programming DNA segments. In this work, we construct DNA molecular systems based on DNA strand displacement performing computation of logic gates.
Xiaolong Shi   +5 more
doaj   +5 more sources

Double Synchronization Based on DNA Strand Displacement Reaction [PDF]

open access: yesIEEE Access, 2020
As an important part of biological computing, DNA strand displacement technology is used to construct complex biochemical circuits. Reversible molecular chemical reactions are basic chemical reactions.
Junwei Sun   +3 more
doaj   +2 more sources

Logical Reasoning Based on DNA Strand Displacement [PDF]

open access: yesJisuanji kexue, 2022
A computational model for logical reasoning is proposed based on DNA strand displacement reactions.Firstly,this way does not rely on fluorescent labeling or other DNA experimental technique.The corresponding relationship between the concentration change ...
WU Li-bo, HUANG Yu-fang
doaj   +1 more source

Natural and Modified Oligonucleotide Sequences Show Distinct Strand Displacement Kinetics and These Are Affected Further by Molecular Crowders

open access: yesBiomolecules, 2022
DNA and RNA strand exchange is a process of fundamental importance in biology. Herein, we used a FRET-based assay to investigate, for the first time, the stand exchange kinetics of natural DNA, natural RNA, and locked nucleic acid (LNA)-modified DNA ...
Ivana Domljanovic   +4 more
doaj   +1 more source

Post-replicative nick translation occurs on the lagging strand during prolonged depletion of DNA ligase I in Saccharomyces cerevisiae

open access: yesG3: Genes, Genomes, Genetics, 2021
During lagging-strand synthesis, strand-displacement synthesis by DNA polymerase delta (Pol ∂), coupled to nucleolytic cleavage of DNA flap structures, produces a nick-translation reaction that replaces the DNA at the 5′ end of the preceding Okazaki ...
Natasha C Koussa, Duncan J Smith
doaj   +1 more source

DNA Logic Multiplexing Using Toehold-Mediated Strand Displacement

open access: yesIEEE Access, 2020
Since the discovery of the DNA Strand Displacement mechanism, researchers have implemented a lot of applications, such as DNA computing, DNA Circuits, Logic gates, and Chemical Reaction network.
Congzhou Chen   +4 more
doaj   +1 more source

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