Results 31 to 40 of about 37,201 (270)

Four-Analog Computation Based on DNA Strand Displacement [PDF]

open access: yesACS Omega, 2017
Chengye Zou   +5 more
doaj   +2 more sources

Natural and Modified Oligonucleotide Sequences Show Distinct Strand Displacement Kinetics and These Are Affected Further by Molecular Crowders

open access: yesBiomolecules, 2022
DNA and RNA strand exchange is a process of fundamental importance in biology. Herein, we used a FRET-based assay to investigate, for the first time, the stand exchange kinetics of natural DNA, natural RNA, and locked nucleic acid (LNA)-modified DNA ...
Ivana Domljanovic   +4 more
doaj   +1 more source

Scalable DNA recognition circuits based on DNA strand displacement. [PDF]

open access: yesNanoscale Adv
A scalable recognition circuit was designed and implemented using DNA and eventually a molecular comparator was constructed.
Wang F   +5 more
europepmc   +3 more sources

Sequencing double-stranded DNA by strand displacement [PDF]

open access: yesNucleic Acids Research, 1997
Duplex probes with five base single-stranded overhangs can capture dsDNA targets from type IIS restriction nuclease digests. Ligation generates a predesigned nick site, where DNA polymerase can generate sequencing ladders by strand displacement or nick translation in the presence of trace amounts of dideoxynucleotides.
D J, Fu   +3 more
openaire   +2 more sources

Digital DNA Strand Displacement for Molecular Computing

open access: yes, 2023
Multiplexed analysis of feature biomarkers enhances the accuracy of molecular diagnostic results. Molecular computing systems exhibited potentials for intelligent analysis of multiplexed biomarkers.
Xin, Su   +7 more
core   +1 more source

Heterochiral DNA Strand-Displacement Based on Chimeric d/l-Oligonucleotides. [PDF]

open access: yesACS Synth Biol, 2019
Heterochiral DNA strand-displacement reactions enable sequence-specific interfacing of oligonucleotide enantiomers, making it possible to interface native d-nucleic acids with molecular circuits built using nuclease-resistant l-DNA.
Young BE, Sczepanski JT.
europepmc   +2 more sources

Rapid Visual Authentication Based on DNA Strand Displacement [PDF]

open access: yesACS Applied Materials & Interfaces, 2021
Novel ways to track and verify items of a high value or security is an ever-present need. Taggants made from deoxyribonucleic acid (DNA) have several advantageous properties, such as high information density and robust synthesis; however, existing methods require laboratory techniques to verify, limiting applications.
Kimberly L. Berk   +11 more
openaire   +2 more sources

The Effect of Basepair Mismatch on DNA Strand Displacement. [PDF]

open access: yesBiophys J, 2016
DNA strand displacement is a key reaction in DNA homologous recombination and DNA mismatch repair and is also heavily utilized in DNA-based computation and locomotion. Despite its ubiquity in science and engineering, sequence-dependent effects of displacement kinetics have not been extensively characterized.
Broadwater DWB, Kim HD.
europepmc   +5 more sources

Post-replicative nick translation occurs on the lagging strand during prolonged depletion of DNA ligase I in Saccharomyces cerevisiae

open access: yesG3: Genes, Genomes, Genetics, 2021
During lagging-strand synthesis, strand-displacement synthesis by DNA polymerase delta (Pol ∂), coupled to nucleolytic cleavage of DNA flap structures, produces a nick-translation reaction that replaces the DNA at the 5′ end of the preceding Okazaki ...
Natasha C Koussa, Duncan J Smith
doaj   +1 more source

DNA Logic Multiplexing Using Toehold-Mediated Strand Displacement

open access: yesIEEE Access, 2020
Since the discovery of the DNA Strand Displacement mechanism, researchers have implemented a lot of applications, such as DNA computing, DNA Circuits, Logic gates, and Chemical Reaction network.
Congzhou Chen   +4 more
doaj   +1 more source

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