Results 1 to 10 of about 194,325 (281)

Diversity of Fungal DNA Methyltransferases and Their Association With DNA Methylation Patterns [PDF]

Frontiers in Microbiology, 2021
DNA methyltransferases (DNMTs) are a group of proteins that catalyze DNA methylation by transferring a methyl group to DNA. The genetic variation in DNMTs results in differential DNA methylation patterns associated with various biological processes.
Yu-Shin Nai, Yu-Shin Nai, Yu-Chun Huang, Yu-Chun Huang, Yu-Chun Huang, Ming-Ren Yen, Pao-Yang Chen   +6 more
doaj   +5 more sources

Comparison of methods for isolating fungal DNA [PDF]

Practical Laboratory Medicine, 2021
Objectives: The main aim of this work was to compare the methods of DNA isolation in the moulds of genus Mucorales with special regard to the amount and purity of the DNA acquired. The acquired DNA was then amplified by specific real-time PCR.
Ilaria Galliano, Valentina Daprà, Elena Zaniol, Carla Alliaudi, Elisa Graziano, Paola Montanari, Cristina Calvi, Massimiliano Bergallo   +7 more
doaj   +5 more sources

Optimizing fungal DNA extraction and purification for Oxford Nanopore untargeted shotgun metagenomic sequencing from simulated hemoculture specimens [PDF]

mSystems
Long-read metagenomics provides a promising alternative approach to fungal identification, circumventing methodological biases, associated with DNA amplification, which is a prerequisite for DNA barcoding/metabarcoding based on the primary fungal DNA ...
Nattapong Langsiri, Wieland Meyer, Laszlo Irinyi, Navaporn Worasilchai, Nuttapon Pombubpa, Thidathip Wongsurawat, Piroon Jenjaroenpun, J. Jennifer Luangsa-ard, Ariya Chindamporn   +8 more
doaj   +2 more sources

The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community Recovery [PDF]

Frontiers in Microbiology, 2019
Our understanding of human gut microbiota in health and disease depends on accurate and reproducible microbial data acquisition. The critical step in this process is to apply an appropriate methodology to extract microbial DNA, since biases introduced ...
Kristýna Fiedorová, Kristýna Fiedorová, Kristýna Fiedorová, Matěj Radvanský, Eva Němcová, Hana Grombiříková, Juraj Bosák, Michaela Černochová, Matej Lexa, David Šmajs, Tomáš Freiberger, Tomáš Freiberger, Tomáš Freiberger   +12 more
doaj   +2 more sources

Optimizing a modified cetyltrimethylammonium bromide protocol for fungal DNA extraction: Insights from multilocus gene amplification [PDF]

Open Life Sciences
Genomic DNA (gDNA) extraction is an important step in many molecular studies of fungal biology, and it is necessary to evaluate the efficiency, cost-effectiveness, and efficacy of different extraction methods to ensure successful amplification of the ...
Dar Gulam Jeelani, Nazir Ruqeya, Wani Shakil A., Farooq Saleem, Aziz Tariq, Albekairi Thamer H.   +5 more
doaj   +2 more sources

Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA. [PDF]

Sci Data
Ovaskainen O, Abrego N, Furneaux B, Hardwick B, Somervuo P, Palorinne I, Andrew NR, Babiy UV, Bao T, Bazzano G, Bondarchuk SN, Bonebrake TC, Brennan GL, Bret-Harte S, Bässler C, Cagnolo L, Cameron EK, Chapurlat E, Creer S, D'Acqui LP, de Vere N, Desprez-Loustau ML, Dongmo MAK, Dyrholm Jacobsen IB, Fisher BL, Flores de Jesus M, Gilbert GS, Griffith GW, Gritsuk AA, Gross A, Grudd H, Halme P, Hanna R, Hansen J, Hansen LH, Hegbe ADMT, Hill S, Hogg ID, Hultman J, Hyde KD, Hynson NA, Ivanova N, Karisto P, Kerdraon D, Knorre A, Krisai-Greilhuber I, Kurhinen J, Kuzmina M, Lecomte N, Lecomte E, Loaiza V, Lundin E, Meire A, Mešić A, Miettinen O, Monkhause N, Mortimer P, Müller J, Nilsson RH, Nonti PYC, Nordén J, Nordén B, Paz C, Pellikka P, Pereira D, Petch G, Pitkänen JM, Popa F, Potter C, Purhonen J, Pätsi S, Rafiq A, Raharinjanahary D, Rakos N, Rathnayaka AR, Raundrup K, Rebriev YA, Rikkinen J, Rogers HMK, Rogovsky A, Rozhkov Y, Runnel K, Saarto A, Savchenko A, Schlegel M, Schmidt NM, Seibold S, Skjøth C, Stengel E, Sutyrina SV, Syvänperä I, Tedersoo L, Timm J, Tipton L, Toju H, Uscka-Perzanowska M, van der Bank M, Herman van der Bank F, Vandenbrink B, Ventura S, Vignisson SR, Wang X, Weisser WW, Wijesinghe SN, Joseph Wright S, Yang C, Yorou NS, Young A, Yu DW, Zakharov EV, Hebert PDN, Roslin T.   +111 more
europepmc   +3 more sources

Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding? [PDF]

IMA Fungus, 2020
Lücking R, Aime MC, Robbertse B, Miller AN, Ariyawansa HA, Aoki T, Cardinali G, Crous PW, Druzhinina IS, Geiser DM, Hawksworth DL, Hyde KD, Irinyi L, Jeewon R, Johnston PR, Kirk PM, Malosso E, May TW, Meyer W, Öpik M, Robert V, Stadler M, Thines M, Vu D, Yurkov AM, Zhang N, Schoch CL.   +26 more
europepmc   +3 more sources

Molecular diagnostics in cancer patients with suspected respiratory mold infections [PDF]

Journal of Clinical Microbiology
Invasive fungal infections (IFIs), including aspergillosis and mucormycosis, are serious complications in cancer patients. Reliable detection of etiologic agents is challenging but important for optimal patient management.
V. Rickerts, J. Springer, J. Gerkrath, D. Korczynski, J. Kessel, I. Wieters, T. Liebregts, J. Steinmann, O. A. Cornely, P. Koehler, S. Schwartz, T. Elgeti, L. Meintker, S. W. Krause, J. Held, W. J. Heinz, B. Willinger, G. Maschmeyer, S. Voigt, J. Reiche, J. J. Vehreschild, H. Einsele, D. Teschner, J. Löffler   +23 more
doaj   +2 more sources

The Brief Case: A case of tinea corporis caused by drug-resistant Trichophyton indotineae identified by broad-range fungal DNA sequencing. [PDF]

J Clin Microbiol
Smith A, Wong-O'Brien B, Lieberman JA, Cookson BT, Grinager E, Truong TT.   +5 more
europepmc   +3 more sources

Optimized protocol for culturing and extracting DNA from fungal isolates associated with brown spot needle blight in pine trees. [PDF]

PLoS ONE
Effective culturing and DNA extraction protocols are essential for advancing research on fungal pathogens of brown spot needle blight (BSNB) that infect loblolly pine (Pinus taeda) and other Pinus species. We evaluated the performance of four widely used
Temitope Ruth Folorunso, Gabriel Silva, Marilis E Girón, Tess Lindow, Micah Persyn, Lori Eckhardt, Janna R Willoughby   +6 more
doaj   +2 more sources