Results 11 to 20 of about 516,921 (266)

Packing nanomechanics of viral genomes [PDF]

open access: yesThe European Physical Journal E, 2008
We investigate the osmotic equilibrium between a bulk polyethylene glycol (PEG) solution and DNA tightly packed in a spherical capsid. We base our analysis on the equations of thermodynamic equilibrium in terms of osmotic pressure. The equality between external osmotic pressure of PEG and osmotic pressure of tightly packed DNA gives us the DNA ...
Šiber, Antonio   +3 more
openaire   +2 more sources

Viral Genomics and Bioinformatics [PDF]

open access: yesViruses, 2010
From the recognition by Ivanovski in 1892 that tobacco mosaic disease is caused and transmitted by fine pore filtrates [1], viruses have been isolated, characterized, identified and studied from animals, plants, protists, bacteria and even other viruses [2,3].
openaire   +3 more sources

INVERTED REPEATS IN VIRAL GENOMES [PDF]

open access: yesFluctuation and Noise Letters, 2005
We investigate 738 complete genomes of viruses to detect the presence of short inverted repeats. The number of inverted repeats found is compared with the prediction obtained for a Bernoullian and for a Markovian control model. We find as a statistical regularity that the number of observed inverted repeats is often greater than the one expected in ...
Spano, M.   +3 more
openaire   +2 more sources

Distinct genetic architectures and environmental factors associate with host response to the γ2-herpesvirus infections

open access: yesNature Communications, 2020
Disease prognosis after infection with Kaposi’s sarcoma-associated herpesvirus and Epstein-Barr Virus is highly variable. Here the authors carry out epidemiological and genetic analysis of a Ugandan cohort and suggest complex interactions may influence ...
Neneh Sallah   +19 more
doaj   +1 more source

PCIP-seq: simultaneous sequencing of integrated viral genomes and their insertion sites with long reads

open access: yesGenome Biology, 2021
The integration of a viral genome into the host genome has a major impact on the trajectory of the infected cell. Integration location and variation within the associated viral genome can influence both clonal expansion and persistence of infected cells.
Maria Artesi   +19 more
doaj   +1 more source

Genomic epidemiology of SARS-CoV-2 virus with a bioinformatics platform

open access: yesUniversidad Médica Pinareña, 2020
Introduction: viral epidemics have presented a risk to human health since they can turn into pandemics and affect a large part of the population, especially for poor developing countries. In 2020, the worldwide pandemic of COVID-19 is underway.
Sebastian Iglesias-Osores   +4 more
doaj   +2 more sources

Complete Genome Sequence of Elephant Endotheliotropic Herpesvirus 4, the First Example of a GC-Rich Branch Proboscivirus

open access: yesmSphere, 2016
A novel group of mammalian DNA viruses called elephant endotheliotropic herpesviruses (EEHVs) belonging to the Proboscivirus genus has been associated with nearly 100 cases of highly lethal acute hemorrhagic disease in young Asian elephants worldwide ...
Paul D. Ling   +8 more
doaj   +1 more source

Genomic Analysis of Viral Outbreaks [PDF]

open access: yesAnnual Review of Virology, 2016
Genomic analysis is a powerful tool for understanding viral disease outbreaks. Sequencing of viral samples is now easier and cheaper than ever before and can supplement epidemiological methods by providing nucleotide-level resolution of outbreak-causing pathogens.
Shirlee, Wohl   +2 more
openaire   +2 more sources

Genomics in Plant Viral Research

open access: yesViruses, 2022
Plant viruses constitute a large group of pathogens causing damaging diseases in many agricultural and horticultural crops around the world [...]
Solomon Maina, Brendan Rodoni
openaire   +3 more sources

Comparison of the Gene Coding Contents and Other Unusual Features of the GC-Rich and AT-Rich Branch Probosciviruses

open access: yesmSphere, 2016
Nearly 100 cases of lethal acute hemorrhagic disease in young Asian elephants have been reported worldwide. All tested cases contained high levels of elephant endotheliotropic herpesvirus (EEHV) DNA in pathological blood or tissue samples.
Paul D. Ling   +5 more
doaj   +1 more source

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