Results 11 to 20 of about 25,229,043 (255)

Genome signatures, self-organizing maps and higher order phylogenies: a parametric analysis [PDF]

open access: yes, 2007
Genome signatures are data vectors derived from the compositional statistics of DNA. The self-organizing map (SOM) is a neural network method for the conceptualisation of relationships within complex data, such as genome signatures.
Gatherer, Derek
core   +10 more sources

Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling

open access: yesBMC Genomics, 2021
Background Elucidation of immune populations with single-cell RNA-seq has greatly benefited the field of immunology by deepening the characterization of immune heterogeneity and leading to the discovery of new subtypes.
Tracy M. Yamawaki   +10 more
doaj   +1 more source

Wnt signaling related transcripts and their relationship to energy metabolism in C2C12 myoblasts under temperature stress [PDF]

open access: yesPeerJ, 2021
Temperature stress is one of the main environmental stressors affecting the welfare, health and productivity of livestock. Temperature changes can modify cell membrane components, disrupting the crosstalk between the cell and its surroundings by ...
Marua Abu Risha   +7 more
doaj   +2 more sources

Application of the 3′ mRNA-Seq using unique molecular identifiers in highly degraded RNA derived from formalin-fixed, paraffin-embedded tissue

open access: yesBMC Genomics, 2021
Background Archival formalin-fixed, paraffin-embedded (FFPE) tissue samples with clinical and histological data are a singularly valuable resource for developing new molecular biomarkers.
Jin Sung Jang   +7 more
doaj   +1 more source

Creation of a High-Yield AAV Vector Production Platform in Suspension Cells Using a Design-of-Experiment Approach

open access: yesMolecular Therapy: Methods & Clinical Development, 2020
Recombinant adeno-associated virus (rAAV) vectors are a leading gene delivery platform, but vector manufacturing remains a challenge. New methods are needed to increase rAAV yields and reduce costs. Past efforts to improve rAAV production have focused on
Huiren Zhao   +8 more
doaj   +1 more source

Pooled Screens Identify GPR108 and TM9SF2 as Host Cell Factors Critical for AAV Transduction

open access: yesMolecular Therapy: Methods & Clinical Development, 2020
Adeno-associated virus (AAV) has been used extensively as a vector for gene therapy. Despite its widespread use, the mechanisms by which AAV enters the cell and is trafficked to the nucleus are poorly understood.
W. Hans Meisen   +8 more
doaj   +1 more source

Chamber-enriched gene expression profiles in failing human hearts with reduced ejection fraction

open access: yesScientific Reports, 2021
Heart failure with reduced ejection fraction (HFrEF) constitutes 50% of HF hospitalizations and is characterized by high rates of mortality. To explore the underlying mechanisms of HFrEF etiology and progression, we studied the molecular and cellular ...
Xin Luo   +12 more
doaj   +1 more source

Temmy-bioinformatics/Phoxinus-Reference-Genome-Analysis: Phoxinus phoxinus reference genome analysis

open access: yes, 2023
<p>Bash and R-scripts used for the analysis of the <em>Phoxinus phoxinus</em> reference genome</p ...
Temitope Oriowo
core   +1 more source

Coordinated regulation of WNT/β-catenin, c-Met, and integrin signalling pathways by miR-193b controls triple negative breast cancer metastatic traits

open access: yesBMC Cancer, 2021
Background Triple negative breast cancer (TNBC) is the most aggressive subtype of breast cancer (BC). Treatment options for TNBC patients are limited and further insights into disease aetiology are needed to develop better therapeutic approaches ...
Chiara Giacomelli   +12 more
doaj   +1 more source

Clonal heterogeneity in ER+ breast cancer reveals the proteasome and PKC as potential therapeutic targets

open access: yesnpj Breast Cancer, 2023
Intratumoral heterogeneity impacts the success or failure of anti-cancer therapies. Here, we investigated the evolution and mechanistic heterogeneity in clonal populations of cell models for estrogen receptor positive breast cancer.
Lukas Beumers   +14 more
doaj   +1 more source

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