Results 41 to 50 of about 1,479,681 (326)
Current Research in Microbial Sciences, 2023 Bacillus cabrialesii TE3T is a strictly aerobic and Gram-stain-positive plant growth-promoting bacterium, motile and catalase-positive. In addition, strain TE3T was also recently described as a biological control agent.
Valeria Valenzuela Ruiz +5 more
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bioRxiv, 2022 Large-scale whole genome sequencing (WGS) studies and biobanks are rapidly generating a multitude of coding and non-coding variants. They provide an unprecedented resource for illuminating the genetic basis of human diseases.
Hufeng Zhou +23 more
semanticscholar +1 more source
Genquire: genome annotation browser/editor [PDF]
Bioinformatics, 2002 Abstract Summary: We present a software package, Genquire, that allows visualization, querying, hand editing, and de novo markup of complete or partially annotated genomes. The system is written in Perl/Tk and uses, where possible, existing BioPerl data models and methods for representation and manipulation of the sequence and annotation
Mark Wilkinson +2 more
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BMC Bioinformatics, 2007 Background Apollo, a genome annotation viewer and editor, has become a widely used genome annotation and visualization tool for distributed genome annotation projects.
Mayer Klaus FX +3 more
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Wellcome Open Research, 2021 We present a genome assembly from an individual female Rana temporaria (the common frog; Chordata; Amphibia; Anura; Ranidae). The genome sequence is 4.11 gigabases in span.
Jeffrey W. Streicher
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Genome (re‐)annotation and open‐source annotation pipelines [PDF]
Microbial Biotechnology, 2010 These days, more and more scientists are diving into genome sequencing projects, urged by fast and cheap next‐generation sequencing technologies. Only to discover that they are quickly drowning in an unfathomable sea of sequence data and gasping for help from experts to make biological sense of this ensuing disaster.
Siezen, R.J., Hijum, S.A.F.T. van
openaire +3 more sources
mSystems, 2020 Prokaryotic genome annotation is heavily dependent on automated gene annotation pipelines that are prone to propagate errors and underestimate genome complexity.
Patrick Willems +2 more
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PLoS Comput. Biol., 2020 In the modern genomic era, scientists without extensive bioinformatic training need to apply high-power computational analyses to critical tasks like phage genome annotation.
Jolene Ramsey +8 more
semanticscholar +1 more source
F1000Research, 2023 Background: Advancements in DNA sequencing technology have transformed the field of bacterial genomics, allowing for faster and more cost effective chromosome level assemblies compared to a decade ago.
Tatiana Amabile de Campos +2 more
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Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
bioRxiv, 2016 Orthology assignment is ideally suited for functional inference. However, because predicting orthology is computationally intensive at large scale, and most pipelines relatively in accessible, less precise homology-based functional transfer is still the ...
J. Huerta-Cepas +6 more
semanticscholar +1 more source