Results 21 to 30 of about 339,780 (261)

Bovine Genome Database: supporting community annotation and analysis of the Bos taurus genome

open access: yesBMC Genomics, 2010
Background A goal of the Bovine Genome Database (BGD; http://BovineGenome.org) has been to support the Bovine Genome Sequencing and Analysis Consortium (BGSAC) in the annotation and analysis of the bovine genome.
Childs Kevin L   +6 more
doaj   +1 more source

Correction of the Caulobacter crescentus NA1000 genome annotation. [PDF]

open access: yesPLoS ONE, 2014
Bacterial genome annotations are accumulating rapidly in the GenBank database and the use of automated annotation technologies to create these annotations has become the norm.
Bert Ely, LaTia Etheredge Scott
doaj   +1 more source

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

open access: yesBMC Bioinformatics, 2011
Background Second-generation sequencing technologies are precipitating major shifts with regards to what kinds of genomes are being sequenced and how they are annotated.
Holt Carson, Yandell Mark
doaj   +1 more source

Review on the Computational Genome Annotation of Sequences Obtained by Next-Generation Sequencing

open access: yesBiology, 2020
Next-Generation Sequencing (NGS) has made it easier to obtain genome-wide sequence data and it has shifted the research focus into genome annotation. The challenging tasks involved in annotation rely on the currently available tools and techniques to ...
Girum Fitihamlak Ejigu, Jaehee Jung
doaj   +1 more source

Complete genome sequencing of Bacillus cabrialesii TE3T: A plant growth-promoting and biological control agent isolated from wheat (Triticum turgidum subsp. durum) in the Yaqui Valley

open access: yesCurrent Research in Microbial Sciences, 2023
Bacillus cabrialesii TE3T is a strictly aerobic and Gram-stain-positive plant growth-promoting bacterium, motile and catalase-positive. In addition, strain TE3T was also recently described as a biological control agent.
Valeria Valenzuela Ruiz   +5 more
doaj   +1 more source

Tips for improving genome annotation quality

open access: yesGenomics Communications
With the advancement of sequencing technology and genome assembly algorithms, we can easily obtain high-quality genome assembly results, however, the remaining challenge is accurate genome annotation. As the cornerstone for downstream analysis, there are
Lan Lan   +6 more
doaj   +1 more source

Galaxy Genome Annotation: Galaxy as a platform for the annotation of genomes

open access: yes, 2023
Galaxy Genome Annotation (GGA) is a project focusing on developments and resources to turn Galaxy into a complete and efficient platform for the structural and functional annotation of genome sequences. In this talk, we will present an update on the material produced by the GGA community in the last years on this topic.
Bretaudeau, Anthony, Rasche, Helena
openaire   +1 more source

The genome sequence of the common frog, Rana temporaria Linnaeus 1758 [version 1; peer review: 2 approved]

open access: yesWellcome Open Research, 2021
We present a genome assembly from an individual female Rana temporaria (the common frog; Chordata; Amphibia; Anura; Ranidae). The genome sequence is 4.11 gigabases in span.
Jeffrey W. Streicher
doaj   +1 more source

Apollo2Go: a web service adapter for the Apollo genome viewer to enable distributed genome annotation

open access: yesBMC Bioinformatics, 2007
Background Apollo, a genome annotation viewer and editor, has become a widely used genome annotation and visualization tool for distributed genome annotation projects.
Mayer Klaus FX   +3 more
doaj   +1 more source

Lost and Found: Re-searching and Re-scoring Proteomics Data Aids Genome Annotation and Improves Proteome Coverage

open access: yesmSystems, 2020
Prokaryotic genome annotation is heavily dependent on automated gene annotation pipelines that are prone to propagate errors and underestimate genome complexity.
Patrick Willems   +2 more
doaj   +1 more source

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