Results 41 to 50 of about 484,203 (191)
BMC Bioinformatics, 2011 Background Second-generation sequencing technologies are precipitating major shifts with regards to what kinds of genomes are being sequenced and how they are annotated.
Holt Carson, Yandell Mark
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Wellcome Open Research, 2021 We present a genome assembly from an individual female Rana temporaria (the common frog; Chordata; Amphibia; Anura; Ranidae). The genome sequence is 4.11 gigabases in span.
Jeffrey W. Streicher
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The Chlamydomonas genome project: A decade on [PDF]
, 2014 The green alga Chlamydomonas reinhardtii is a popular unicellular organism for studying photosynthesis, cilia biogenesis, and micronutrient homeostasis.
Aksoy, M +19 more
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Annotation confidence score for genome annotation: a genome comparison approach [PDF]
Bioinformatics, 2009 Abstract Motivation: The massively parallel sequencing technology can be used by small research labs to generate genome sequences of their research interest. However, annotation of genomes still relies on the manual process, which becomes a serious bottleneck to the high-throughput genome projects.
Youngik, Yang, Donald, Gilbert, Sun, Kim
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Tips for improving genome annotation quality
Genomics CommunicationsWith the advancement of sequencing technology and genome assembly algorithms, we can easily obtain high-quality genome assembly results, however, the remaining challenge is accurate genome annotation. As the cornerstone for downstream analysis, there are
Lan Lan +6 more
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Review on the Computational Genome Annotation of Sequences Obtained by Next-Generation Sequencing
Biology, 2020 Next-Generation Sequencing (NGS) has made it easier to obtain genome-wide sequence data and it has shifted the research focus into genome annotation. The challenging tasks involved in annotation rely on the currently available tools and techniques to ...
Girum Fitihamlak Ejigu, Jaehee Jung
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Correction of the Caulobacter crescentus NA1000 genome annotation. [PDF]
PLoS ONE, 2014 Bacterial genome annotations are accumulating rapidly in the GenBank database and the use of automated annotation technologies to create these annotations has become the norm.
Bert Ely, LaTia Etheredge Scott
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Genquire: genome annotation browser/editor [PDF]
Bioinformatics, 2002 Abstract Summary: We present a software package, Genquire, that allows visualization, querying, hand editing, and de novo markup of complete or partially annotated genomes. The system is written in Perl/Tk and uses, where possible, existing BioPerl data models and methods for representation and manipulation of the sequence and annotation
Mark Wilkinson +2 more
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Current Research in Microbial Sciences, 2023 Bacillus cabrialesii TE3T is a strictly aerobic and Gram-stain-positive plant growth-promoting bacterium, motile and catalase-positive. In addition, strain TE3T was also recently described as a biological control agent.
Valeria Valenzuela Ruiz +5 more
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Genome (re‐)annotation and open‐source annotation pipelines [PDF]
Microbial Biotechnology, 2010 These days, more and more scientists are diving into genome sequencing projects, urged by fast and cheap next‐generation sequencing technologies. Only to discover that they are quickly drowning in an unfathomable sea of sequence data and gasping for help from experts to make biological sense of this ensuing disaster.
Siezen, R.J., Hijum, S.A.F.T. van
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