Results 31 to 40 of about 523,896 (324)
Removing batch effects for prediction problems with frozen surrogate variable analysis [PDF]
, 2013 Batch effects are responsible for the failure of promising genomic prognos- tic signatures, major ambiguities in published genomic results, and retractions of widely-publicized findings.
Bravo, Héctor Corrada +2 more
core +3 more sources
Interest of phenomic prediction as an alternative to genomic prediction in grapevine [PDF]
Plant Methods, 2021 Abstract Background Phenomic prediction has been defined as an alternative to genomic prediction by using spectra instead of molecular markers. A reflectance spectrum provides information on the biochemical composition within a tissue, itself being under genetic determinism. Thus, a relationship matrix built from spectra
Brault, Charlotte +12 more
openaire +6 more sources
Bayesian methods for jointly estimating genomic breeding values of one continuous and one threshold trait. [PDF]
PLoS ONE, 2017 Genomic selection has become a useful tool for animal and plant breeding. Currently, genomic evaluation is usually carried out using a single-trait model.
Chonglong Wang +5 more
doaj +1 more source
Animals, 2023 Enhancing the accuracy of genomic prediction is a key goal in genomic selection (GS) research. Integrating prior biological information into GS methods using appropriate models can improve prediction accuracy for complex traits.
Yiyi Liu +12 more
doaj +1 more source
Predicted Residual Error Sum of Squares of Mixed Models: An Application for Genomic Prediction. [PDF]
, 2017 Genomic prediction is a statistical method to predict phenotypes of polygenic traits using high-throughput genomic data. Most diseases and behaviors in humans and animals are polygenic traits. The majority of agronomic traits in crops are also polygenic.
Xu, Shizhong
core +2 more sources
Promoter prediction in the human genome [PDF]
Bioinformatics, 2001 Abstract Computational prediction of eukaryotic polII promoters has been one of the most elusive problems despite considerable effort devoted to the study. Researchers have looked for various types of signals around the transcriptional start site (TSS), viz.
Sridhar Hannenhalli, Samuel Levy
openaire +3 more sources
Animal, 2020 Combining different swine populations in genomic prediction can be an important tool, leading to an increased accuracy of genomic prediction using single nucleotide polymorphism (SNP) chip data compared with within-population genomic.
S. Ye, H. Song, X. Ding, Z. Zhang, J. Li
doaj +1 more source
PLoS Genetics, 2020 Pan-genomic open reading frames (ORFs) potentially carry protein-coding gene or coding variant information in a population. In this study, we suggest that pan-genomic ORFs are promising to be utilized in estimation of heritability and genomic prediction.
Zhengcao Li, Henner Simianer
doaj +1 more source
Prediction of operons in microbial genomes [PDF]
Nucleic Acids Research, 2001 Operon structure is an important organization feature of bacterial genomes. Many sets of genes occur in the same order on multiple genomes; these conserved gene groupings represent candidate operons. This study describes a computational method to estimate the likelihood that such conserved gene sets form operons.
Maria D. Ermolaeva +2 more
openaire +3 more sources
How predictable is genome evolution?
eLife, 2019 Similar patterns of genomic divergence have been observed in the evolution of plant species separated by oceans.
Matthew J Coathup +2 more
openaire +6 more sources