The modular architecture of Cellvibrio japonicus mannanases in glycoside hydrolase families 5 and 26 points to differences in their role in mannan degradation [PDF]
Deborah Hogg+6 more
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The microbiologist's guide to metaproteomics
Metaproteomics within the multi‐omics framework provides a comprehensive view of microbial systems by identifying proteins, quantifying their levels, detecting posttranslational modifications (PTMs), mapping protein–protein interactions (PPIs), and localizing proteins.
Tim Van Den Bossche+31 more
wiley +1 more source
Identification of the Catalytic Residues in Family 52 Glycoside Hydrolase, a β-Xylosidase from Geobacillus stearothermophilus T-6 [PDF]
Tsafrir Bravman+6 more
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Abstract BACKGROUND Growing global demand for mushrooms means an increased production of solid mushroom waste (SMW), necessitating novel approaches for waste valorization. Waste stalks and misshapen mushrooms are rich in chitin‐glucan polymer – a promising source of prebiotics.
Anastasia Klemanska+5 more
wiley +1 more source
A hydrophobic platform as a mechanistically relevant transition state stabilising factor appears to be present in the active centre of all glycoside hydrolases [PDF]
Wim Nerinckx+2 more
openalex +1 more source
Understanding how foods and enteral feedings influence the gut microbiome
Abstract The gut microbiome supports both gut and overall health. Diet is known to be one of the driving factors that influences the gut microbiome. The foods we eat, the dietary and nondietary components they contain, various food consumption patterns, and the ratio of nutrients consumed have been shown to impact gut microbiome composition and ...
Gail A. M. Cresci
wiley +1 more source
Identification and analysis of catalytic TIM barrel domains in seven further glycoside hydrolase families [PDF]
Daniel J. Rigden+2 more
openalex +1 more source
Molecular modeling of family GH16 glycoside hydrolases: Potential roles for xyloglucan transglucosylases/hydrolases in cell wall modification in the poaceae [PDF]
Marco Strohmeier+5 more
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Cis‐nonProline peptides: Genuine occurrences and their functional roles
Abstract While cis peptides preceding proline can occur about 5% of the time, cis peptides preceding any other residue (“cis‐nonPro” peptides) are an extremely rare feature in protein structures, of considerable importance for two opposite reasons. On one hand, their genuine occurrences are mostly found at sites critical to biological function, from ...
Jane S. Richardson+5 more
wiley +1 more source
Bioinformatics of the glycoside hydrolase family 57 and identification of catalytic residues in amylopullulanase from Thermococcus hydrothermalis [PDF]
Richard Zona+3 more
openalex +1 more source