Results 131 to 140 of about 20,056,738 (185)

Assessing reproducibility of Hi-C chromatin interactions using stratum-adjusted irreproducible discovery rate. [PDF]

Bioinformatics
Xue C, Zhang F, Li Q.
europepmc   +1 more source

EpiInsula: calibrated regression of the Hi-C insulation score from cell-type-specific epigenomic signal. [PDF]

Brief Bioinform
Jin Y, Chen T, Gao J, Tong M, Xu G, Zhang X, Liu W, Shen Y.   +7 more
europepmc   +1 more source

Hi-Cformer enables multiscale chromatin contact map modeling for single-cell Hi-C data analysis. [PDF]

Sci Adv
Wu X, Wang Z, Jiang R, Chen X.
europepmc   +1 more source

VirBinn improves viral genome binning from metagenomic Hi-C through graph diffusion. [PDF]

Bioinformatics
Wang S, Du Y.
europepmc   +1 more source

Hi-C informed kernel association test for integrating 3D genome structure into variant-set analysis. [PDF]

Brief Bioinform
Huang Y, Basu R, Cheng Y, Lu W, Holloway ST, Chen C, Li Y, Tzeng JY.   +7 more
europepmc   +1 more source

Physics-Based Modeling of Sparse Single-Cell Hi-C Uncovers Structural and Epigenetic Variability. [PDF]

Int J Mol Sci
Vercellone F, Kundu S, Esposito A, Chiariello AM, Conte M, Abraham A, Fontana A, Di Pierno F, Guha S, Di Carluccio C, Olimpo M, Nicodemi M, Casale FP, Bianco S.   +13 more
europepmc   +1 more source

Cross-platform Hi-C meta-analysis identifies functional insulators that actively block enhancer-promoter interactions. [PDF]

Nat Commun
Cui J, Xu W, Lang X, Zhang S, Lu L, Liu X, Li Y, Jin F.   +7 more
europepmc   +1 more source

Assessing resistome host range across water reclamation in three geographically distinct communities using Hi-C sequencing. [PDF]

Appl Environ Microbiol
Philo SE, Saldana MA, Golwala H, Zhou S, Delgado Vela J, Stadler LB, Smith AL.   +6 more
europepmc   +1 more source

Persistent homology-based multiscale Hi-C analysis uncovers TADs-mediated gene regulation. [PDF]

Sci Rep
Chiang Z, Wu Y.
europepmc   +1 more source

Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies. [PDF]

Genome Biol
Sur A, Noble WS, Myler PJ.
europepmc   +1 more source