Results 111 to 120 of about 20,056,738 (185)

DeCGR: an interactive toolkit for deciphering complex genomic rearrangements from Hi-C data

BMC Genomics
Background Complex genomic rearrangements (CGRs) drive the restructuring of chromatin architecture, resulting in significant interactions among rearranged fragments, visible as anomalous interaction blocks in chromatin contact maps generated by ...
Junping Li, Minghui Sun, Yusen Ye, Lin Gao   +3 more
doaj   +1 more source

The pipeline of Hi-C assembly v1 [PDF]

, 2018
From here, You can know detail methods of Hi-C assembly of the Betta splendens genome.
openaire   +1 more source

Tracking reservoirs of antimicrobial resistance genes in microbiota using metagenomic Hi-C

, 2021
This study aimed at tracking reservoirs of antimicrobial resistance genes in a complex environmental sample using metagenomic Hi-C. A pooled sample of macerated tissues from clinical bovine digital dermatitis lesions was used for this purpose.
Iowa State University (17854979)
core  

Loop Evolution Observed with AIA and Hi-C [PDF]

, 2012
In the past decade, the evolution of EUV loops has been used to infer the loop substructure. With the recent launch of High Resolution Coronal Imager (Hi-C), this inference can be validated.
Korreck, Kelly E., Golub, Leon, Mulu-Moore, Fana, Cirtain, Jonathan W., Winebarger, Amy R., DeForest, Craig E., Title, Alan M., Kobayashi, Ken, Walsh, Robert William, De Pontieu, Bart, Weber, Mark, Kuzin, Sergei   +11 more
core  

Hi-PACE/hipace: v24.06

<p><a href="https://github.com/AMReX-Codes/amrex/releases/tag/24.03">AMReX</a>: release 24.06 <a href="https://github.com/openPMD/openPMD-api/releases/tag/0.15.2">openPMD-api</a>: release 0.15.2</p> <h2>What's ...
Lehe, Remi, Sinn, Alexander, Diederichs, Severin, Zhang, Weiqun, Huebl, Axel, Myers, Andrew, Thévenet, Maxence   +6 more
core   +1 more source

Hi-C and RNA-chromatin interactions for lncRNA ENSG00000272462.

(A) The top track shows the genomic location of the interaction, followed by tracks showing the Hi-C annotated interactions between lncRNA ENSG00000272462 and its candidate target genes in different cell types.
Imad Abugessaisa (627440), Yasushi Okazaki (3100), Josée Dostie (262897), Takeya Kasukawa (3041), Michiel J. L. de Hoon (11434447), Chikashi Terao (137128), Jordan A. Ramilowski (2259964), Lisa J. Strug (8293947), Chung Chau Hon (4520500), Jessica Severin (178475), Andrey I. Sigorskikh (18510105), Howard Y. Chang (215450), Michael M. Hoffman (5846618), Masayoshi Itoh (15728), Ken Yagi (246069), Chi Wai Yip (15068455), Mickaël Mendez (3864016), Piero Carninci (3015), Ivan V. Kulakovskiy (7592957), Saumya Agrawal (3441386), Tanvir Alam (638619), Kayoko Yasuzawa (18510108), Jay W. Shin (9030986), Vsevolod J. Makeev (7592954), Juha Kere (11900), Naoto Kondo (32868), Masaru Koido (14059995), Andrey Buyan (18510102), Yunjing Li (644191)   +28 more
core   +1 more source

Additional file 1 of Benchmarking alignment strategies for Hi-C reads in metagenomic Hi-C data

Additional file 1: Supplementary notes, tables, and figures. Contains Supplementary Notes 1–2, Supplementary Tables S1–S11, and Supplementary Figures S1–S22.
Wang, Yuqiu, Zuo, Wenxuan, Huang, Jiawei, Sun, Fengzhu, Du, Yuxuan   +4 more
openaire   +1 more source

Hi-PACE/hipace: v24.03

<p><a href="https://github.com/AMReX-Codes/amrex/releases/tag/24.03">AMReX</a>: release 24.03 <a href="https://github.com/openPMD/openPMD-api/releases/tag/0.15.2">openPMD-api</a>: release 0.15.2</p> <h2>What's ...
Lehe, Remi, Sinn, Alexander, Diederichs, Severin, Zhang, Weiqun, Huebl, Axel, Myers, Andrew, Thévenet, Maxence   +6 more
core   +1 more source

Heatmap of Hi-C assembly chromosome interactions

Heatmap of Hi-C assembly chromosome ...
Le Zhao (18070336)
core   +1 more source

Resolving Host-Associated Antimicrobial Resistance in Municipal Wastewater Using Hi-C Metagenomics. [PDF]

Microorganisms
Senok A, Verma S, Shouqair D, Alghafri R, Moradigaravand D, Nassar R, Everett D, Goering R, Khan M.   +8 more
europepmc   +1 more source